Streptomyces aureoverticillatus: G3H79_27785
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Entry
G3H79_27785 CDS
T08343
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
saov
Streptomyces aureoverticillatus
Pathway
saov03030
DNA replication
saov03430
Mismatch repair
saov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3H79_27785 (dnaE)
03430 Mismatch repair
G3H79_27785 (dnaE)
03440 Homologous recombination
G3H79_27785 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saov03032
]
G3H79_27785 (dnaE)
03400 DNA repair and recombination proteins [BR:
saov03400
]
G3H79_27785 (dnaE)
Enzymes [BR:
saov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3H79_27785 (dnaE)
DNA replication proteins [BR:
saov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G3H79_27785 (dnaE)
DNA repair and recombination proteins [BR:
saov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G3H79_27785 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QIB46304
LinkDB
All DBs
Position
6778008..6781550
Genome browser
AA seq
1180 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANKTGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEAVQAASEYQD
IFGKDRYFLELMDHGIDIERRVREDLLRVGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAVDSSDAWQEGCANTLLVAEQIDTTGMFEKRD
LMPKFDIPEEGYTNTTWFKEEVRRGMNRRYPGGVPDDRQRQADYEMDIIIQMGFPGYFLV
VADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERVSMPDVD
IDFDERRRVEVIRYVTEKYGEDKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAM
PADVLGKGIDLSGITDPKHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAA
GVIMSSEPIIEHAPIWVRHTDGVTITQWDYPQCESLGLIKMDFLGLRNLTIMDDAVKMVE
ANKGIELEMLSLPLDDPKTYELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSAL
YRPGPMGMNSHTNYAERKNGRQEITPIHKELEEPLKETLGLTYGLIVYQEQVQKAAQIIA
GYSLGEADILRRVMGKKKPEELEKNFVLFQKGARDKGFSDAAIQALWDVLVPFAGYAFNK
AHSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNE
SVHNFAAQGDDVILFGLEAVRNVGTNVVESIIRSRKAKGKFASFPDYLDKVEAAACNKRT
TESLIKAGAFDTMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEDDSSEPGFG
LDVEFTTDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDFSDGAV
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGR
LDKREDVPRLVAMEMQVPDLSNAGTNAPVLITIPTVKVSPPMVTRLGEILSHHRGNSEVR
IKLQGAQKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagccgcctttcacgcacctgcacgtccacacccagtactcgctcctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcg
atgtccgaccacggcaacctgcacggggcgtacgacttcttccacacggcgaagaaggcc
ggggtgacgccgatcatcgggatcgaggcgtatgtggcgcccgagtcgcgccgcaacaag
cggaagatccagtgggggcagccgcaccagaagcgcgacgacgtgtcgggttcgggtggt
tacacgcacaagacgatctgggcggcgaacaagacggggctgcacaacctcttccggctg
tcctcggacgcgtacgccgagggctggctgcagaagtggccccggatggacaaggagacg
atctcccagtggtcggaggggctgatcgcctcgaccggctgtccttcgggtgagctgcag
acgcgactgcggctcgggcagttcgacgaggcggtgcaggcggcttcggagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacgggatcgacatcgagcgg
cgggtgcgcgaggacctgctgcgggtcggcaagaagctgggcatcccgccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgacggcgcacgacgccctgctgtgcatc
cagacgggcaagaacctctcggacccggaccgcttccggttcgacggcacgggctactac
ctgaaatcgacggacgagatgtacgccgtcgattcctccgacgcctggcaggaggggtgc
gcgaacacgctgctcgtggcggagcagatcgacacgaccggcatgttcgagaagcgcgac
ctcatgccgaagttcgacatcccggaagagggctacaccaacaccacctggttcaaggag
gaagtgcggcgcggcatgaaccgccgctatcccggaggtgtccccgacgaccgccagcgc
caggcggactacgagatggacatcatcatccagatggggttcccgggatacttcctggtc
gtcgcggacttcatcatgtgggccaagaacaacggcatcgcggtgggcccggggcgtggc
tccgcggccggctcgatcgtggcgtacgccatgggcatcaccgacctcgacccgatcgag
cacggactgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgac
atcgacttcgacgagcgtcggcgcgtcgaagtgatcaggtacgtgaccgagaagtacggc
gaggacaaggtcgccatgatcggtacgtacggaaagatcaaggcgaagaacgccatcaag
gactccgcccgagtcctcggctatccgtacgcgatgggcgaccgcctcaccaaggccatg
cccgccgacgtcctcggcaagggcatcgacctctccggcatcaccgaccccaagcacccg
cgctacagcgaggcgggcgagatccgggggatgtacgagaacgagccggacgtcaagaag
gtcatcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgccgcg
ggcgtgatcatgtccagcgagcccatcatcgagcacgccccgatctgggtccggcacacc
gacggcgtgaccatcacgcagtgggactatccccagtgcgagtcgctcggcctgatcaag
atggacttcctgggcctcaggaacctcacgatcatggacgacgccgtgaagatggtggag
gccaacaagggcatcgagctggagatgctctcccttccgctcgacgaccccaagacgtac
gaactgctctgccgcggtgacacgctcggcgtgttccagttcgacggcggcccgatgcgc
tcgctgctccgccagatgcagcccgacaacttcgaggacatttccgccgtctcggccctg
taccggccgggcccgatgggcatgaactcgcacacgaactacgcggagcgcaagaacggc
cgccaggagatcacgccgatccacaaggagctcgaagagcccctgaaggagacgctcggc
ctcacctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcccagatcatcgcc
ggatactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaa
gagctggagaagaacttcgtcctcttccagaagggcgcccgcgacaagggcttctcggac
gccgcgatccaggccctctgggacgtcctggtgcccttcgccggatacgcgttcaacaag
gcgcactcgtccgcgtacggcctcgtcacctactggaccgcgtacctcaaggcgaattac
ccggccgagtacatggcggcgctgctgacgtccgtgaaggacgacaaggacaagtcggcg
gtgtatctgaacgagtgccgtcgtatgggcatcaaggtgctgccgccgaacgtgaacgag
tcggtgcacaacttcgccgcccagggtgacgacgtgatcctgttcggcctcgaggcggtg
cgcaacgtcggcacgaacgtggtcgagtcgatcatccgctcgcgcaaggcgaaggggaag
ttcgcctcgttcccggactacctggacaaggtggaggcggccgcctgcaacaagcgcacc
acggagtcgctgatcaaggcgggcgcgttcgacaccatggggcacacccgcaagggcctg
accgcgcagtacgagccgatgatcgacaacgtggtggcggtcaagcgcaaggaggccgag
gggcagttcgacctgttcggcgggatgggcgaggacgactccagcgagcccggcttcggc
ctggacgtcgagttcaccaccgacgagtgggacaagacgtatctcctcgcccaggagcgg
gagatgctgggtctgtacgtctcggaccacccgctgttcggccttgagcacgtgctctcg
gacaaggcggacgcggggatcgggcagctgaccggcggagacttctccgacggagcggtt
gtcaccatcggcggcatcatctccgggctacagcgcaagatgaccaagcagggcaacgcc
tgggcgatcgccacggtggaggacctcgcgggctcgatcgagtgcatgttcttcccggcg
acgtatcagctggtgtccacgcaactggtcgaggacgccgtggtgttcgtcaagggacgc
ctcgacaagcgggaggacgtccctcgcctcgtcgccatggagatgcaggtccccgacctg
tcgaacgccggcaccaacgcgcccgtcctcatcaccatcccgaccgtgaaggtgagcccg
ccgatggtcacccgcctcggtgagatcctcagccaccaccggggcaacagcgaggtgcgg
atcaagctccagggcgcccagaagaccacggtgctccggctcgaccggcaccgcgtgaag
cccgacccggcgctcttcggcgacctgaaggtgctgctcggcccgtcctgcctggcgggc
tga
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integrated database retrieval system
