Sulfobacillus acidophilus DSM 10332: Sulac_1857
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Entry
Sulac_1857 CDS
T01746
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sap
Sulfobacillus acidophilus DSM 10332
Pathway
sap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sulac_1857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sap03019
]
Sulac_1857
03009 Ribosome biogenesis [BR:
sap03009
]
Sulac_1857
Enzymes [BR:
sap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sulac_1857
Messenger RNA biogenesis [BR:
sap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sulac_1857
Ribosome biogenesis [BR:
sap03009
]
Prokaryotic type
rRNA helicases
Sulac_1857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
Helicase_RecD
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEW05350
UniProt:
G8U0P7
LinkDB
All DBs
Position
complement(1799921..1801498)
Genome browser
AA seq
525 aa
AA seq
DB search
MEQQELSFKAMGLSSSVIKALEEMGFEEPSPIQAKTIPIILEGHDLIGQAQTGTGKTAAF
GIPIVERLDHRSKRVEALVLAPTRELAIQVAEEITKIGKFSGIKVVPIYGGQSYDRQIRA
LEHGAQVVIGTPGRVMDHIRRGTLKLDHVQMMVLDEADEMLDMGFIEDIEFILKNVPENR
QTLLFSATVPDPIAKLARRYLKDPVHVNISPERLTVPSIEQVFYEVREFEKLDALTRILD
MEEAERTIIFCRTKKRVDELTEGLQARGYTAEALHGDLNQVQRNRVMKRFKEGGSEILVA
TDVAARGLDIDNVTHVINYDLPQDTESYVHRIGRTGRAGRTGTAISLINPKEFRQLRQME
RVLRVRLQRRPLPTPADVAEKQREMLKNRLAEEIQRGVLPSYQELVMQLAEEYDSVDIAA
AAIRLMVDKGREDKSDLDFGETGAEPGMVRMFMNLGRMDRVTPADIVRGLAEGAGIQGSV
IGLIDIYDRFTFVEIPKDAAHKVLQNVGAIVIRGKSVNLEPARPR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaacaagaattgtcattcaaagcgatggggcttagcagttccgtcatcaaggcc
ttagaagagatgggcttcgaagagccgtcacccatccaggccaaaaccatcccgattatt
ctcgagggacatgatttaattggtcaggcgcaaaccggtaccggcaaaacagccgctttc
ggcattccgattgtcgaacggctcgaccaccgatcgaaacgggtggaagccctggttttg
gcccccacacgggaattagcgattcaggtagccgaagaaatcaccaaaatcggcaagttc
tccggcattaaagtcgtcccgatctatggcgggcagtcctatgaccgccaaatccgggcg
ctggaacatggtgcccaagtcgtgattgggacgccgggccgggtgatggaccatattcgt
cggggcaccctgaaactggaccatgtccaaatgatggtgctcgacgaagccgatgaaatg
ttggacatgggctttatcgaagatatcgagttcattttgaaaaacgtgccggaaaatcgt
caaaccctgcttttctcggccaccgtcccggatccgattgccaaactggcccggcggtat
ttgaaagatccggttcatgtcaatattagccccgagcggctgaccgtgccgtccattgaa
caagtgttctacgaagtgcgcgaatttgagaaactggatgccctcacccgcattttagac
atggaagaagcggaacgcaccatcattttctgccggaccaaaaaacgcgtggatgagctg
acagaaggactccaagctcgcggatataccgccgaggcgttacacggcgatctcaaccag
gtccagcgcaatcgcgtcatgaagcggtttaaggaaggcggcagcgaaattttggtcgct
accgacgtggccgcccgtgggctggacatcgacaatgtcactcacgtcataaactatgac
ctgccacaagataccgaaagctatgttcaccggattggccgaaccggccgcgccgggcga
accggcacggccatttcgctcattaatccgaaagagtttcgccagctccgacaaatggaa
cgggtccttcgcgttcggctgcagcggcgaccgttgccgaccccggccgatgtcgccgaa
aagcagcgggaaatgttgaagaatcggctggcggaagagattcaacgaggggtattgccg
agttatcaggaattggtgatgcaattagccgaggaatatgattcggtcgatattgccgcc
gctgccatccgcctcatggtggacaagggccgggaggacaaatccgatctggactttggg
gaaaccggcgccgaacccggcatggtccgaatgtttatgaatttaggccggatggaccgt
gtgacacccgccgatattgtgcggggattagccgaaggggccggcattcaaggcagtgtc
atcggtttaatcgacatttatgatcgctttacctttgtcgaaatccccaaggatgcggcc
cacaaggttctgcaaaatgtcggcgccatcgtcatccggggtaagagcgtaaacctggag
ccggcgcgcccccgctaa
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