| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sapi00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAPIS_v1c00440 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:sapi03021]
SAPIS_v1c00440 (rpoC)
03400 DNA repair and recombination proteins [BR:sapi03400]
SAPIS_v1c00440 (rpoC)
Enzymes [BR:sapi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAPIS_v1c00440 (rpoC)
Transcription machinery [BR:sapi03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAPIS_v1c00440 (rpoC)
DNA repair and recombination proteins [BR:sapi03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAPIS_v1c00440 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
42779..46543
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| AA seq |
1254 aa
MGNPNKRMIKIELASPDVIRSWSRGEVTKPETINYKTLKTEKEGLFDERIFGPTKNYECS
CGKYKKVKNKGKVCERCGVEITESIVRRERMGHIELEEPVTHIWMLKVAPSRIASILDLK
TKEVEEVVYFVSHIVLDPGNSRHLKRGQVLDLGNAKASLKTREKLLKTLEDIKVNLEPES
LQWKRAEILIQQLKSPQTPFSMDEAASFISRNIQAKFGIGASAIEELLSNIDLSKEIAKI
KEDLKERKGSTEQNKLMKRLEVLDSLQKSQSRPEWMILHVIPVIPPDIRPIIQLDGGRFT
TSEINDLYRRIIIRNERLKKVKTMGAPSIIVNNEKRMLQEAVDALLDNERKPRPVTGKDK
RALKSLTSILKGKQGRFRQNLLGKRVDYSGRSVIAIGPDLKMYQAGIPRDMAITLFKPFV
IRRLQENELAENVKVAEKMIAANDSKVWDVLEEVIKDRPVLLNRAPTLHRLGIQAFEPKL
VKGKAIRLHPLVTTAFNADFDGDQMAVHLPISDEAVAEARALMLGSKAILGPKDGKPIVT
PTQDMILGNYYITTEEKSNETNQVKGEATIFSSCEEVHIAYETDTVSLNAIVAIPVSELK
NKMFSQEDQDKYLITTVGKIIFNQMFNEEFPWIVNNNILNAEEEIKKFLLPSDIDLRKYI
QEEYVIQQPIKKKELSLIIERYFKAYGAQKTAQMLDNMKDLGFKYSSKSGTTISAADVVA
YTEKFEDFKIADEKVAQITEFYNLGMLTKTEKKRRVINVWSQVKDKIQTKLEDVLKKDTK
NPIFVMADSGARGNVSNFTQLVGMRGLMNDPKGDIKEIPIKSSFREGLTVSEYFISTHGA
RKGMADVALKTADSGYLTRRLVDISQEIIVTEEDCGTSKGFNVHSIVETKHDNIIVPLKD
RLVGRYIFETIRDHTGKIIVETNDLVTIDIADEIIKAGVEEVNIRTVLTCDTNRGVCQKC
YGINLATGDPVSIGEPVGVVAAQSIGEPGTQLTMRTFHTGGVAGGADITQGLPRIKELLD
VTTPKGSIAIISQIDGVVKEAKEEDGILSITVTSDQDERKYKSQYGAITRVKEGDEVTRG
QKLTEGAINIKELLEVARIEDVQNYILKEVQKVYRLQGIEISDKYIEIIVKQMLNKVKII
DSGDTPLLPGEIISSRNYRTEVLKAIEAGQKPPLAKHVIFGIKKAPLESDSWLSSASFQD
TARVLVKAVIKGKVDKLEGLKENIMLGNLIPAGTGLTGSADIIQRGKDTYDSEY |
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| NT seq |
3765 nt +upstreamnt +downstreamnt
atgggaaacccaaataaaagaatgataaaaatagagcttgcttctcctgatgtgattaga
tcttgatcacgtggtgaagtaacaaaaccagaaacaataaattataagacactgaaaacc
gaaaaagaaggtctatttgatgaaagaatctttggaccaactaaaaactacgaatgtagt
tgcggtaaatataaaaaagttaaaaataagggaaaagtttgtgaacgttgtggagttgaa
attactgagtcaatagtaagacgtgaacgaatgggacatatcgaattagaagaaccagtt
acacatatatgaatgcttaaagtagctccttcaagaatcgcttcaattttagatttaaaa
acaaaagaagttgaagaagtagtatactttgtaagtcatattgttcttgatcctggtaac
tcacgtcacctaaaaagaggacaagtactagatcttggtaatgcaaaagcaagtttaaaa
actagagagaagctcttgaaaacattggaagacatcaaggtaaaccttgaaccagaatca
ttacaatgaaaaagagcggaaatcttaatacaacaacttaaatctccgcaaacaccattc
tcaatggatgaggcagcttcattcatttcaagaaatattcaagctaagtttggtattgga
gcaagtgcaattgaagaacttctaagtaatatagatctttctaaagaaatagctaagatt
aaagaagatttaaaagaacgtaaaggttcaaccgaacaaaataaacttatgaaacgtctt
gaagttttagattcactacaaaaatcacaatcaagacctgagtgaatgatattacatgta
atacctgtaatcccaccagatattagaccaataatccaattagatggaggaaggtttaca
acatctgaaataaacgacttatacagaagaataataatcagaaatgaacgtcttaaaaaa
gttaaaacaatgggtgcaccaagtataattgttaataatgaaaaacgtatgctacaagaa
gctgttgatgcattattagataacgaacgtaagccaagacctgtaaccggaaaagacaaa
cgtgctttaaaatctttaacatcaattcttaaaggtaaacaaggacgtttccgtcaaaac
cttttaggaaaacgtgttgactactcagggagatcagttattgctattggtccagattta
aaaatgtatcaagcaggaattcctcgtgatatggctatcacattgttcaagccatttgtt
ataagaagactacaagaaaatgagttagctgagaatgtaaaagtagcggaaaaaatgatc
gctgcaaatgattctaaagtttgagacgtacttgaggaagttataaaagatagaccagta
ttgttaaaccgtgcaccgactcttcaccgtttaggtattcaagcatttgaacctaaacta
gtaaaagggaaagctattcgtttacaccctctagtaacaactgcatttaacgccgacttt
gatggtgaccaaatggcagtccatttaccaattagtgatgaagcggttgctgaggcaaga
gctcttatgcttggaagtaaggcaattttgggtcctaaagacggaaaaccaattgtaact
ccaacacaagatatgattcttggaaactattacattacaactgaagaaaaaagtaatgaa
acaaatcaagtaaaaggagaagcaactatattctcttcttgcgaagaagttcatatagca
tacgaaactgatacagtctctctaaatgctatcgttgcaataccagttagtgaacttaaa
aataaaatgtttagtcaagaagaccaagacaaatatctaataaccacagtcggaaaaatt
attttcaatcaaatgttcaatgaagaattcccttgaattgttaataacaatatattgaat
gctgaagaagaaattaaaaaattcttattaccttccgatattgatttacgtaaatatatt
caagaagaatatgtaatacaacaaccaatcaagaaaaaagaactctcattaattattgaa
agatactttaaagcatatggagcacaaaaaactgcacaaatgttagataatatgaaggac
ttaggattcaaatactcttctaagtctggaactacaattagtgcagccgatgttgttgct
tatactgaaaagtttgaagatttcaaaattgcggatgaaaaagttgcacaaattacagag
ttttacaaccttggtatgttaactaagaccgagaaaaaacgtcgtgtcataaatgtatga
tcacaagtaaaagataaaattcaaacaaaactagaagatgttcttaaaaaggatacaaaa
aacccaatctttgtgatggctgattctggtgcccgtggtaatgtttctaacttcacacaa
cttgtaggtatgaggggacttatgaatgaccctaagggtgatattaaagaaattccgatt
aaatcttcttttagagaaggtctaaccgtttctgaatactttatttcaacccacggtgcg
agaaaaggtatggccgatgtggctcttaaaacagctgactctggttatttaacaagaaga
cttgtagacatatcacaagaaatcattgtaaccgaagaggactgtggtacaagcaaagga
tttaatgttcattcaattgttgaaacaaaacatgataacataattgttcctttgaaagac
cgacttgttggtagatatattttcgaaacaattagagatcatactggtaaaatcattgtt
gaaacaaatgatttagtaacaattgacatagctgacgaaataattaaggccggtgttgag
gaagtaaacattaggactgtcttgacttgtgataccaatagaggtgtttgtcaaaagtgt
tacggtatcaacttagcaactggtgatcctgtttcaattggtgaaccagttggtgtagtt
gccgctcaatcaattggtgaacccggaacacaacttacaatgcgtacattccatactggt
ggtgttgctggtggagccgatattacccaagggctaccacgtattaaagagttactcgat
gttacaacaccaaaaggttcaattgcaatcatatctcaaatagatggtgtggttaaagaa
gcgaaagaagaagatggaatattgtctataacagttacttcagaccaagatgagagaaaa
tataaatctcaatatggtgcaattacgcgtgttaaagaaggtgacgaagttacaagggga
caaaaacttaccgaaggtgcaataaatattaaagaattgcttgaggtagctagaattgaa
gatgttcaaaattacatattaaaagaagttcaaaaagtttaccgtttacaaggtattgaa
atttctgataaatatatagaaataattgttaaacaaatgttaaacaaagtaaaaataatt
gattctggagatactccacttcttccaggagaaattatatcttcacgaaattatcgaaca
gaggttttaaaagctattgaagctggacaaaaacctccattagcaaaacacgtaatattt
ggaattaaaaaagcaccacttgagtctgattcttgattatcaagtgcgtcattccaagat
acagcccgtgttcttgttaaagcagttatcaagggtaaagttgataaacttgagggttta
aaagaaaacattatgttaggaaacttaatccctgctggaactggattaacaggatcagct
gatattattcaaagaggtaaagacacttacgactcagaatattaa |
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