Spiroplasma apis: SAPIS_v1c03980
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Entry
SAPIS_v1c03980 CDS
T02945
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sapi
Spiroplasma apis
Brite
KEGG Orthology (KO) [BR:
sapi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sapi03016
]
SAPIS_v1c03980 (truB)
Enzymes [BR:
sapi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAPIS_v1c03980 (truB)
Transfer RNA biogenesis [BR:
sapi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAPIS_v1c03980 (truB)
Prokaryotic type
SAPIS_v1c03980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Toxin-JAB1
Motif
Other DBs
NCBI-ProteinID:
AHB36244
UniProt:
V5RI64
LinkDB
All DBs
Position
460017..460943
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AA seq
308 aa
AA seq
DB search
MSQKSGIYLINKPSGITSNDLIQKLKRKFQIKKIGHAGTLDPLATGIMVILVNQATKISN
YLLSKDKIYNVTMKLFIQTDSDDITGAVLKEETPRKFSKKEITDVVNKYDGYMYEQYPPI
YSAVKVEGKKLYEYARNNQSVEIKPRTVTINSCKLLDYNSKLGTIKLSVSCSKGTYIRSL
VKDIAKDLSTISTVKELERVASGEFFLTEAKTIEEVTENDIISIYDGLIQNKQALIEYHK
IEDIKQGKAITLVNINLPIVFIIDDKKNVIAIYRWVAHELYACQRGLWEVDDKAILTDAE
RSNFNGIN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaaatcaggtatttatttaataaataaaccaagcggtataacttcaaatgat
ctaatacaaaaactaaaaagaaaattccaaataaagaaaattggtcatgcaggtacatta
gatccattggcgacagggataatggtaatacttgttaaccaagctactaaaatttcaaat
tacttattgagtaaagataagatttacaatgttacaatgaaattatttattcaaacagat
tctgatgacatcactggagcagtattgaaagaagaaacaccaagaaagtttagtaaaaaa
gaaattactgatgttgtcaataaatacgatggatatatgtatgaacaatatccaccaatc
tattctgctgttaaagtagagggtaagaagttatacgaatatgcaagaaataatcaatct
gttgaaataaaacctagaactgtgacgataaatagttgtaagcttttagattataattca
aaactaggaacaattaagcttagtgttagttgtagtaagggaacttacataagaagttta
gtaaaagatattgcaaaagacttatcaacgattagtacagtcaaggagttagaaagagtg
gcttctggtgagttcttcttaactgaagcaaaaactattgaggaagtgactgagaacgat
atcatctctatctatgatggattaattcaaaataaacaagctctgatagaataccataaa
attgaagatataaaacaaggtaaagctattacattagttaatataaaccttccaattgtt
tttataattgatgacaaaaaaaatgtcatagcaatatatcgatgagtggcacacgaactt
tatgcatgtcaaagaggattatgagaagttgatgataaggcaattttaacagacgctgaa
aggtcaaattttaatggtattaattaa
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