Spiroplasma apis: SAPIS_v1c04090
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Entry
SAPIS_v1c04090 CDS
T02945
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sapi
Spiroplasma apis
Brite
KEGG Orthology (KO) [BR:
sapi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapi03019
]
SAPIS_v1c04090
03009 Ribosome biogenesis [BR:
sapi03009
]
SAPIS_v1c04090
Enzymes [BR:
sapi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAPIS_v1c04090
Messenger RNA biogenesis [BR:
sapi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAPIS_v1c04090
Ribosome biogenesis [BR:
sapi03009
]
Prokaryotic type
rRNA helicases
SAPIS_v1c04090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
WhiA_N
AAA_19
PhoH
DUF4985
WSD
Motif
Other DBs
NCBI-ProteinID:
AHB36255
UniProt:
V5RKB8
LinkDB
All DBs
Position
469135..470499
Genome browser
AA seq
454 aa
AA seq
DB search
MKFSDFGFKKFLNDALEKIGFVSPTKIQEKVIPLLKKHKSVIAQSHTGTGKTHSFLLPIL
NNIDYESKKTQFVIVTPTRELARQIYKNVKELLEFNSESSVALFVGGDDFEKQAIALKNK
QPLIVVGTPTRLKNLYEQNALQITTAKNVVIDECDMIFDLGFIDELDFILSKMNENVSIS
LFSATISNGLKPFLSKYLSKAIFIESTEKKPSNKNIEHVLVWTKNKENKDVLKIIVDSIN
PYIAMIFVNKKDQIKEIISWLNEFGIKNVGELHGDLDARVRTNMQKRIQNMEFKWIVASD
VASRGMDIDGVSHIISIDLPKELEYYVHRSGRTGRNNYTGQSYILFNSNNQHQIDTLKSM
GFTFTNKKLVQNDLVEITQKSKKKVINKNNPANIEEQKIISKYKAKSIKPGYKKKRKAEI
DKIKKDIRRKHIKESIAKIKKAKYKKRREDLFDN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcagattttggatttaaaaaattcttaaatgatgcattagaaaaaatagga
tttgttagtcctacaaaaatacaagaaaaggtaatacctttacttaaaaaacataaatca
gtgattgctcaatcacatacagggactggaaagacacattcatttttattacctattttg
aacaacattgattatgaaagtaaaaaaacacagtttgtaatagttacgccaactagagaa
cttgcaagacaaatttataaaaatgttaaagagttattagaatttaactctgaaagctca
gttgccttgtttgttggaggagatgacttcgagaaacaagctatagctttaaaaaataaa
caaccattaatagttgttgggacaccaactaggttaaaaaacttgtatgagcaaaatgct
ttacaaatcacaacagctaaaaatgtcgttatcgacgagtgtgatatgatatttgaccta
ggtttcattgatgagttggacttcatattatctaaaatgaatgagaatgtttcaataagt
ttattttcagcaactattagtaatggtttaaaaccatttctatcaaaatatctttctaaa
gctatttttatagagagtactgaaaaaaaaccaagtaataaaaatattgaacacgttcta
gtatgaacaaaaaacaaagaaaataaagatgtactaaaaataatcgtagattcaattaat
ccatatatcgcaatgatttttgtaaataaaaaagatcaaataaaagaaataatttcatga
ctaaatgagtttggtataaaaaatgttggtgaattacacggagatttagatgctcgtgta
agaacaaatatgcaaaagagaatccaaaatatggagtttaaatgaatagttgcaagtgat
gttgcatcccgtggtatggatattgatggtgttagtcatataatttcgatagatttacca
aaagaattggaatattatgttcacaggagtggaagaacaggtagaaataactatactggt
caaagttacattttatttaattcaaataatcaacaccaaattgatactttgaaatcaatg
gggttcacttttacaaataaaaaacttgtacaaaacgatttagttgaaataactcaaaaa
agtaaaaagaaagttataaataaaaataatccagctaacatcgaagaacaaaaaataatc
agcaaatataaagctaaatcaattaaacctggatacaaaaagaaacgtaaggcagaaatc
gataaaattaagaaagacattcgaagaaaacatattaaagaatcaattgctaaaattaaa
aaagcaaaatacaaaaaaagacgtgaagatttgtttgacaattaa
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