Spiroplasma apis: SAPIS_v1c06000
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Entry
SAPIS_v1c06000 CDS
T02945
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sapi
Spiroplasma apis
Pathway
sapi03030
DNA replication
sapi03430
Mismatch repair
sapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAPIS_v1c06000 (holA)
03430 Mismatch repair
SAPIS_v1c06000 (holA)
03440 Homologous recombination
SAPIS_v1c06000 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sapi03032
]
SAPIS_v1c06000 (holA)
03400 DNA repair and recombination proteins [BR:
sapi03400
]
SAPIS_v1c06000 (holA)
Enzymes [BR:
sapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAPIS_v1c06000 (holA)
DNA replication proteins [BR:
sapi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAPIS_v1c06000 (holA)
DNA repair and recombination proteins [BR:
sapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAPIS_v1c06000 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AHB36445
UniProt:
V5RKV6
LinkDB
All DBs
Position
complement(711533..712483)
Genome browser
AA seq
316 aa
AA seq
DB search
MFFIYSSDNYLIKKQVEKITKKLTSDQEYEIYTYSLIDHSIRNIDEQAKTYSLFNTKKLI
IINDCWFMNESKVKLNSDFDLKYIENFLELKSNNVTFIYTLNSEKISKRLKIVKLFESKV
KIIKLDQPTFETKKELVIKKLTTLNKEFEEDAILAFLELIPIDMSIFSNELNKLLSIEKK
ITKEVINSFFNKYMQYDTFEIANAFLTNDIEKFLKSWKDYSESNKDIFGFLMLLANSFII
LRNAIILKEEGQSNSQIASYLSQNPYRIQKLMEQNKWDITQINDKIKLLYILDKSIKEGI
IDNKIIPSVMLLKMFV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgttttttatctattctagtgacaattatttaataaaaaaacaagtagaaaaaataact
aaaaaactaacgtctgatcaagaatatgaaatatatacatattctttgatagatcactca
ataagaaatatcgatgaacaagccaaaacatattctttatttaataccaaaaaactaata
attattaatgattgctgatttatgaatgaatcaaaagttaaattaaatagtgactttgat
ttaaaatatattgagaattttctagaattaaaatcaaataatgtaacctttatatatacc
ttaaacagtgaaaaaatctcaaaaaggctaaaaatagttaaactttttgaaagtaaagtg
aaaattatcaaacttgatcaaccaacatttgaaacaaaaaaagaattagttataaaaaaa
ctgaccactttaaataaggagtttgaagaagatgcaattttagcatttttagagttaata
ccgatagacatgtctattttttcaaatgagttgaacaaattattgagcatagaaaaaaag
ataactaaggaagttattaactcatttttcaacaaatatatgcaatatgacacttttgaa
atagccaatgcatttttgactaatgatattgaaaaatttttaaaaagctgaaaagattac
tcagaaagtaataaagatatattcgggtttttgatgcttttagcaaatagttttataata
ctaagaaacgcaataatattaaaagaagaagggcaaagcaactcacaaatagcttcatat
ttgtctcaaaatccctacagaatacaaaaattaatggagcaaaataagtgagatatcaca
caaattaatgataaaatcaaattgttatatatattagataaaagtatcaaagaaggtatt
atcgataataagattattccttctgtaatgttgttaaaaatgtttgtttaa
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