Spiroplasma apis: SAPIS_v1c07070
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Entry
SAPIS_v1c07070 CDS
T02945
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha (PolC)
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
sapi
Spiroplasma apis
Pathway
sapi03030
DNA replication
sapi03430
Mismatch repair
sapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAPIS_v1c07070 (polC)
03430 Mismatch repair
SAPIS_v1c07070 (polC)
03440 Homologous recombination
SAPIS_v1c07070 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sapi03032
]
SAPIS_v1c07070 (polC)
03400 DNA repair and recombination proteins [BR:
sapi03400
]
SAPIS_v1c07070 (polC)
Enzymes [BR:
sapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAPIS_v1c07070 (polC)
DNA replication proteins [BR:
sapi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAPIS_v1c07070 (polC)
DNA repair and recombination proteins [BR:
sapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAPIS_v1c07070 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
RNase_H_2
DEDDh_C
DNA_pol3_a_NII
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
AHB36552
UniProt:
V5RIQ3
LinkDB
All DBs
Position
complement(835399..839841)
Genome browser
AA seq
1480 aa
AA seq
DB search
MDKSLKEFFDKLSIFLSEEETLYFKDAHLYKKSEFINSLKMLRIFVKLKDFLPIILLERL
ESELVNNTFLPTKLNLQVENTNYNKELIWNYIEYIKDKKAEVKTGTIKTLSPKLIEYNVD
NRTVIFYAENELEKNLLDMHSDYYKNKLIKYGFTNINLSVIVKNDLESNALNDVKKMYED
ASFYNENHLRQNTTVVAKKPKYKSTKVLLETPTYESIADLEENAQNVTIHGQLISKSARV
SKTGRKIYHLPITDGKSSVLCVFFQSDSNPTYFDECTDDNKSFFAGYEDQIINKDDWVAF
NGKYIYSEYEKNYIFYIDKFQKIESKTVLRNDNAVDKRVELHTHTKMSAMDGVSFVKEYI
ETAKRWGWKAIAITDHLNVQSFPDAYWALKNANDSIQSDQDLKLIYGSEVVMLDDDFWFV
KNPKQTKLREAKFVVFDLETTGLSPEYDEIIEFGANVYDYKNGTSKKFDILIKPSKPISK
FTTDLTNITNEMLEDKNTIESEIGNIMEIIKDGILVAHNANFDFNFLNVLAIKFGYGELK
NTVIDTLTLARSLKPKLKNHRLGTVAKAYGILYDEKIAHRADYDAEVLTNLYEHMWSDAK
KIRPIDIDSDWDLFRNNPYEEENHKRVRGHHLNIIAKNQEGLKDLYKIISLSHTKNFLGS
PKIFKSAILEFKNRNNILIGDGCVNGMVFDYARTGTKKMLREAISLLDYIEIQPLSVYKK
LIQVGDLTLEDLKFYLKLIITEAKNLNKLVVATSDAHYVDPDKKIIRDIYINTKGLGGVY
HPLYDFKQRVKDNPDQHLRTTSEMLKEFEWLDDEELVRELVITNPNLIAEVIDSGICPIK
FGSFPPNIDDVDKMLEDECYKNARSLYGEVLPEIVEKRLQKELESIIKHGFAVVYWISHL
LVKKSHEDGYLVGSRGSVGSSFVATTSNITEVNPLKAHYRCPNCKYSDFNTPPEVKCGYD
LEKKVCPECNNEMIGDGHDIPFETFLGFDGDKVPDIDLNFSGEYQPIAHNFTKEMFGENN
VFRAGTISTVADKTAYGFTMGYFEKKFENQSQIRKVEIERLANLCTGVKRTTGQHPGGII
ILPKEYEIEDFTPVNYPADDDTSEWKTTHFDFHSIHDNLLKMDILGHVDPTALRMLYDLT
GVNPITIPTNDKKVYSLFSNLSALDINSDELLGESTGAIGLPEFGTQFVRNMLKETKPQT
FADLVQISGLSHGTDVYVGNAQSLIKDGTANISTVIGCRDDIMVYLMSMNLDASTSFKIM
ESVRKGKGLNKEWIDMMKAHSVPDWYINSCLKIKYMFPKAHATAYVLMAYRVAWYKIYYP
EEYYATWFSTRSDFFDLETTIKGPEAIKSKLEDIKQRQFNKMPVSAKEVGLITTFEVLLE
MYARGITMENINFNISDGMRFKTVINQETGKKILYPPFNVIDSLGEAVANSIVNARKIRQ
ITSVNDLKQRTQVTQTQLQIFAKLKITDNLKDDEQLAFDF
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagtttgaaggagtttttcgataaattaagtatctttttaagtgaagaggaa
actctttattttaaggatgctcatttatataaaaaatctgaattcataaattctttaaaa
atgttacgcatatttgttaagcttaaagatttcttgccgattattttacttgaaagatta
gaatcagagttagttaacaatacatttttaccaactaaactaaacttacaagttgaaaat
acaaactataataaagagttaatttgaaattatatagaatacataaaagataaaaaagct
gaagtcaagacgggtacaattaaaactctttctccaaaactaatagaatacaatgttgat
aatagaacggttattttttatgctgaaaatgaattagaaaaaaatcttctcgatatgcat
tctgattactataaaaataaattaatcaagtacggttttacaaatatcaacttatctgtt
attgttaaaaatgatttagagtcaaatgcattgaatgacgtgaagaaaatgtacgaagat
gcttcgttttataatgaaaatcatttaagacaaaatacaactgttgttgcaaaaaaacct
aaatataaatctactaaagttcttttagaaactccaacttatgagagtattgctgattta
gaagaaaatgctcaaaatgtcacaatacatggtcaattaatttcaaaaagtgctcgtgtt
tctaaaaccggaagaaagatataccaccttccaataacagatggtaaatcatcagttttg
tgtgtcttttttcagtcagactctaatccaacttattttgatgaatgtactgatgataac
aaaagtttttttgcgggttatgaagatcaaataataaacaaagatgattgagtagctttc
aacggaaaatacatttactcagaatatgaaaaaaactatattttttacatagataaattt
cagaaaattgaatcaaaaacagttttaagaaatgataatgcagttgataaaagggtggaa
cttcatactcataccaaaatgagtgcaatggatggtgttagttttgtaaaagaatatatt
gaaactgctaaaagatggggttgaaaagccattgctattacagaccacctaaatgtccaa
tcatttcctgatgcctattgggcgttaaaaaatgcaaatgattctattcaaagcgatcaa
gatttaaaattaatttatggaagtgaagtcgttatgttggatgacgatttctgatttgta
aaaaatcctaagcaaactaaactaagagaagctaaatttgtggtatttgacttagaaaca
acaggtttatcaccagaatatgacgaaataattgaatttggagccaatgtttacgattat
aaaaatgggacttctaaaaagtttgatattttaattaaaccatcaaaacctatttcaaag
ttcacaacagatttaactaatatcacaaatgaaatgcttgaagataaaaatacaatcgaa
tcagaaataggaaacataatggaaataattaaagatggaattttagttgctcacaacgcg
aactttgactttaatttcttaaacgttttggccattaagtttggatatggagaattaaaa
aacacagtaattgatactttaacacttgcacgtagtcttaaaccaaagttaaagaaccat
cgattaggaacggttgctaaggcttatggaatattatatgacgaaaaaattgcccaccgt
gcagattacgatgctgaggttctaactaatctttacgaacatatgtgaagtgatgcaaaa
aaaataagaccaattgacattgatagtgattgagacttgttcagaaataatccttatgaa
gaagaaaaccataaaagagttagaggtcatcacttaaatatcattgccaaaaaccaagaa
ggactaaaagatttatataaaataatttcgttatctcatacaaaaaacttcttaggtagt
ccaaaaatattcaaaagtgctattttagaatttaaaaaccgaaataacatactaattggt
gatggttgtgttaatgggatggtttttgattatgcacgtacaggcactaaaaaaatgcta
cgtgaagcaataagtttattggattatattgaaatacaacctttgagtgtctataaaaaa
ctaatacaagtaggagatttaactctagaagatttgaaattttatttaaaacttataatt
acagaagctaagaatttgaataaattagttgtagctacgagtgatgcacattacgttgac
cctgataagaaaattattcgtgatatttatatcaatacaaaaggactaggtggagtatat
catccgttgtatgatttcaaacaaagagtaaaagataatcctgatcaacatttaagaact
acttctgaaatgttgaaagagtttgaatgacttgatgatgaagaacttgtgagagaactt
gtaattactaatccaaatcttattgcagaagttattgactctggtatatgcccgattaag
tttggttcttttccaccgaatatcgatgacgttgataaaatgcttgaggatgaatgttat
aaaaatgcgagatcactttatggagaagtgttaccagaaattgtggaaaaacgcttacaa
aaagagttagagtcaatcataaaacatggttttgctgtcgtatattgaataagtcacttg
ctagttaaaaaaagtcacgaagatggttatttagttggaagtaggggttctgttggttca
tcatttgtagcaacaacctcgaatataacagaggttaaccccttaaaagcacattatcgt
tgcccgaattgtaaatattctgactttaacacaccaccagaagtgaaatgtggttatgat
ttagaaaaaaaagtttgtccagaatgtaacaacgaaatgataggtgatggtcatgatatt
ccctttgaaacattcctaggttttgatggtgataaagtaccagatattgatttaaacttt
tcaggtgaatatcaaccgattgctcataactttaccaaagaaatgttcggagaaaataat
gttttcagagccggtacaatttcaacagtggcagataaaacagcttatggatttacaatg
ggttattttgaaaaaaaatttgaaaatcaatctcaaattaggaaagttgaaattgaaaga
ttagccaatctttgtactggtgtaaaaagaacaacaggtcaacaccccggaggaataatt
attcttcctaaggaatacgaaattgaagatttcacacctgttaattatccagccgatgat
gatacgagtgaatgaaaaacaacacactttgatttccactcaattcatgataacttatta
aaaatggatattttaggtcatgttgaccctaccgctttaagaatgttatatgatttaacg
ggtgtaaatccaataactatacctacaaatgataaaaaagtttactcattattctctaat
ttgtcagctttagatataaattcagatgaattacttggtgaatcaactggggccattgga
ttacctgaatttggtactcaattcgttagaaatatgttgaaggaaactaaaccacaaaca
tttgctgatttagtccaaatttctggtttgagtcatggtactgatgtctatgttggtaat
gctcaatctttgatcaaagatggaacagctaatatatctactgtaattggttgtagagat
gacataatggtttacttgatgtcaatgaatttagatgcatctacaagttttaaaattatg
gaaagtgttcgtaaaggcaaagggcttaacaaagaatgaattgatatgatgaaggcacat
agtgttcctgattgatatatcaatagttgtttgaaaataaagtatatgttccctaaggcg
catgcaactgcctatgttttgatggcatacagagttgcttgatacaaaatttattatcca
gaagagtattatgcaacttgattttctacaagatcagatttttttgatttagaaacaacc
ataaaaggacctgaggcaattaagtctaagttagaagacattaaacaaagacaatttaat
aaaatgcctgtctctgcaaaagaagtagggcttattacaacttttgaagtacttcttgaa
atgtatgcaaggggtataacaatggaaaatatcaattttaatatttctgatggtatgaga
ttcaaaacagtaattaaccaagaaaccggaaaaaaaatactatatccgcctttcaatgta
atagattctttgggtgaagcagttgctaattcaatagttaacgctagaaagataagacaa
attacaagtgtcaacgacttaaaacaacgaactcaagtaacccaaacgcaattacaaatt
tttgctaagttgaaaattacagataatctaaaagatgatgagcaacttgcattcgatttt
taa
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