Spiroplasma apis: SAPIS_v1c09020
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Entry
SAPIS_v1c09020 CDS
T02945
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sapi
Spiroplasma apis
Pathway
sapi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sapi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAPIS_v1c09020 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sapi03021
]
SAPIS_v1c09020 (rpoA)
03400 DNA repair and recombination proteins [BR:
sapi03400
]
SAPIS_v1c09020 (rpoA)
Enzymes [BR:
sapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAPIS_v1c09020 (rpoA)
Transcription machinery [BR:
sapi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAPIS_v1c09020 (rpoA)
DNA repair and recombination proteins [BR:
sapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAPIS_v1c09020 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AF1548-like_C
HHH_5
I_LWEQ
Egh16-like
Ribosomal_TL5_C
Motif
Other DBs
NCBI-ProteinID:
AHB36747
UniProt:
V5RJ62
LinkDB
All DBs
Position
complement(1067651..1068604)
Genome browser
AA seq
317 aa
AA seq
DB search
MKQFARPEFTLLKEEKNKNYGEFKVEPLERGFGTTLGNAIRRTLLSSTPGAAVYAIKLAG
AAHEFTSIEGIVENVSRIILNIKKLALKIDEKIFEDDEVVELTINSQTVGDVKAGDIEVP
TGVEIINKDLHICTIADGGALNLTLFAKNSRGYRSFKDNKKEKITADSITIDSNYSPIVQ
VAYHVDATKIGKSVDLEKLTLQVETDGTISASDAVATASKVLVEHLQFFVNLNDEINELN
VIGVSNEEDEKELDRLIEDLDFTQRSLNCLKRANINTLRDLVSRSEDDIQEIRNLGRKSL
KEIKDKVVQLGLTFKQD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattcgcaagaccagaatttactttattaaaagaagaaaaaaataaaaactat
ggggaatttaaagtagaacctttggaaagaggttttggtaccacgcttggtaacgcaata
agaagaactcttcttagttcaacaccaggtgcagctgtatatgcaattaaacttgcaggt
gcagctcatgaatttacatcaattgaaggtatagttgaaaatgttagtcgtataattcta
aacattaaaaaattagcacttaaaattgatgaaaaaatatttgaagatgatgaagttgta
gaattaacaataaactctcagacagttggagatgtaaaagcaggagatattgaagttcct
acgggagtggaaataatcaataaagatttacatatatgtacaattgctgacggtggagct
ttaaatttaactttatttgcaaaaaactcaagaggttatcgttcattcaaagacaacaaa
aaagagaaaataacagcggattcaattacaattgattcaaactattctccaatagttcaa
gtggcttatcacgtcgatgctactaaaattggtaaatctgtagatttagaaaagctaact
ttacaagttgaaactgatggaactattagtgcaagcgatgctgttgcaaccgcttcaaaa
gttttagttgaacatttacaattcttcgtaaatctaaacgatgaaatcaatgaacttaat
gtcattggggtatctaatgaagaagacgaaaaagaattagatcgtttaattgaagattta
gactttacacaaagaagtttaaattgtttaaaaagagcaaacatcaatacattacgagat
ttagtatcacgtagtgaagatgatattcaagaaattagaaacttgggtagaaaatcatta
aaagaaatcaaagataaagtggtccaattaggattaacttttaaacaagactag
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