Spiroplasma apis: SAPIS_v1c09370
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Entry
SAPIS_v1c09370 CDS
T02945
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sapi
Spiroplasma apis
Pathway
sapi00010
Glycolysis / Gluconeogenesis
sapi00020
Citrate cycle (TCA cycle)
sapi00260
Glycine, serine and threonine metabolism
sapi00280
Valine, leucine and isoleucine degradation
sapi00620
Pyruvate metabolism
sapi00630
Glyoxylate and dicarboxylate metabolism
sapi00640
Propanoate metabolism
sapi00670
One carbon pool by folate
sapi00785
Lipoic acid metabolism
sapi01100
Metabolic pathways
sapi01110
Biosynthesis of secondary metabolites
sapi01120
Microbial metabolism in diverse environments
sapi01200
Carbon metabolism
sapi01210
2-Oxocarboxylic acid metabolism
sapi01240
Biosynthesis of cofactors
Module
sapi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sapi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SAPIS_v1c09370 (pdhD)
00020 Citrate cycle (TCA cycle)
SAPIS_v1c09370 (pdhD)
00620 Pyruvate metabolism
SAPIS_v1c09370 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
SAPIS_v1c09370 (pdhD)
00640 Propanoate metabolism
SAPIS_v1c09370 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAPIS_v1c09370 (pdhD)
00280 Valine, leucine and isoleucine degradation
SAPIS_v1c09370 (pdhD)
00310 Lysine degradation
SAPIS_v1c09370 (pdhD)
00380 Tryptophan metabolism
SAPIS_v1c09370 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SAPIS_v1c09370 (pdhD)
00670 One carbon pool by folate
SAPIS_v1c09370 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sapi04147
]
SAPIS_v1c09370 (pdhD)
Enzymes [BR:
sapi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SAPIS_v1c09370 (pdhD)
Exosome [BR:
sapi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SAPIS_v1c09370 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
GIDA
Biotin_lipoyl_2
FAD_binding_2
FAD_oxidored
AlaDh_PNT_C
NAD_binding_8
HI0933_like
RnfC_N
GCV_H
HlyD_3
DAO
Thi4
NQRA_N
3HCDH_N
DUF2118
PTS_EIIA_1
GDI
DUF4878
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AHB36782
UniProt:
V5RJ99
LinkDB
All DBs
Position
complement(1093827..1095731)
Genome browser
AA seq
634 aa
AA seq
DB search
MFKVKFADIGEGLTEGLVTEVIVKVGDSVKMGDPLFNVETDKVTSDIFAPVDGIISKILI
EPNQEIKVGDIVVEIDDGKDSPEAAAPKVDASNAEPVEENASVVGATPVSNELIPPRNAT
ARRVPPRPDNVPQKVMRVLKEFSPLGVVHGNNETPPNAPKFSPKDPTKHYDVIIVGAGVG
GYVCAIKCSQLGLKTLVIEKNKYGGVCLNIGCIPTKSLLKSADLYEQITRHASNYGIKVD
LKGVKADWKAIQDRKNGIVDKLTTGVKGLLRKNKVDTVEGEAIAIDKNNIKVGEVVYTTD
NLIIATGSVPNTLNIPGAKEAAEKNWLIDSTGALALSEIPKELIVIGGGVIGIEFACVYK
RLGSKVTILQFLPKILEMLDDDVSKEMTKILLERGNLEIITGANTKEFKDGSVVYEKDGK
LHTIKADYCLQSVGRKVVTSGFDNLGIEKNDKGHININEYCETNIDGVYAIGDVTGKIML
AHVASHEGLIAANRIARKLGNDKAEDIIMNFDRVPSCIYTHPEVASVGFTEEQVKSKNIK
YQAYKFPFAAIGKALADGNTDGFVKIICEPEHKQVLGAHIICNTATDMISEITTLMECEG
TITELSRAIHPHPTLSEAIGEAAEALEFGKPINF
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagttaaatttgcagacatcggtgaaggtctaaccgaagggcttgttaccgaa
gtaatagtaaaagttggtgatagtgttaaaatgggtgatccattgttcaatgtagaaact
gataaagttacatcagatatttttgcaccagttgatggaataatctctaaaatacttatt
gaaccaaatcaagaaataaaagttggtgacattgtagtagaaatagatgatggtaaggat
tctcctgaggcagctgcaccaaaagttgacgcctcaaatgcagaaccagtagaagaaaat
gcctctgtagttggagcgactccagtttcaaacgagttaattcctcctagaaatgcaaca
gctagaagagtcccaccacgaccagataatgtccctcaaaaagtgatgagagtattaaaa
gaatttagtccgttaggtgtagttcatggaaacaatgaaactccacctaatgctcccaaa
ttttcaccaaaagatcccacaaagcattatgatgtgatcatagtaggtgctggtgttggt
ggatatgtttgtgctattaagtgttctcaacttggattaaaaactcttgtaattgagaaa
aataaatatggtggtgtttgtttgaatataggttgtattcctacaaaaagtttattaaaa
tccgccgatctttacgaacaaatcacaagacatgcttctaactatggtataaaagttgat
ttaaaaggcgttaaagctgattgaaaagcaattcaagatcgtaaaaatggaatagttgat
aaactcacaactggtgttaaaggcttattacgtaaaaataaggtagatacagttgaggga
gaagcaatagcaatagacaaaaataacatcaaagtaggggaagtagtttacacaaccgac
aatttaattattgcaacaggtagtgttcctaatacgttaaatattccaggagcaaaagaa
gctgctgaaaaaaactgattgatagattcaactggagcacttgcattatccgaaattcct
aaagaacttatcgtgatcggtggaggtgttatcggtattgaatttgcctgcgtttataaa
agattaggatcaaaagtcacaatcttacaatttttacctaagattcttgaaatgcttgat
gacgatgtttcaaaagaaatgacaaagattcttttagagcgtggaaatttagaaataatt
actggagcaaataccaaggagtttaaagatggttcagttgtttatgaaaaagatggaaaa
ttacacacaattaaagctgattattgtttgcaatcagttggtagaaaagtagtaactagt
ggatttgataatttaggtatagagaaaaacgataaagggcatataaatatcaatgagtat
tgtgagacaaatattgatggtgtatatgcgattggtgatgttactggaaaaattatgtta
gcacacgtagcttcacatgaagggctaattgcagctaatagaatagctcgtaaacttgga
aacgataaagctgaagatattatcatgaactttgatagagtacctagttgtatatatacc
cacccagaagttgcttcggttggatttactgaggaacaagttaagtctaaaaatatcaag
taccaggcttataaatttccattcgcagcaataggtaaagcacttgctgatggtaatacc
gatggttttgtgaagattatttgcgaaccagaacacaagcaagttcttggtgcacatata
atttgtaacactgcaacggatatgatttctgaaatcacaacattaatggaatgtgaagga
accataactgaactctcaagagcaatacatcctcacccaactttgagcgaggcgatcgga
gaggcagcagaagctttggagttcggaaaacctataaacttttaa
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