Salimicrobium sp. PL1-032A: U0355_00860
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Entry
U0355_00860 CDS
T10562
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sapl Salimicrobium sp. PL1-032A
Brite
KEGG Orthology (KO) [BR:
sapl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sapl03032
]
U0355_00860 (gyrB)
03400 DNA repair and recombination proteins [BR:
sapl03400
]
U0355_00860 (gyrB)
Enzymes [BR:
sapl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
U0355_00860 (gyrB)
DNA replication proteins [BR:
sapl03032
]
Prokaryotic type
DNA Topoisomerases
U0355_00860 (gyrB)
DNA repair and recombination proteins [BR:
sapl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U0355_00860 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WVR01871
LinkDB
All DBs
Position
complement(149563..151494)
Genome browser
AA seq
643 aa
AA seq
DB search
MSDEIQRGKEQAYDENQIQVLEGLEAVRKRPGMYIGSTNEKGLHHLVWEIVDNSIDEAMA
GHCDKIQVMIEEDNSITVTDNGRGIPVGIQEKTGRPAVEVIMTVLHAGGKFGGGGYKVSG
GLHGVGASVVNALSDYLEVYVHRDGNLYHQDYKHGVPQKDVAQIGTTDKNGTMIHFRPDH
EIFDETQEYNFDTLANRLRELAFLNRGLTITIEDKRTDYDNGTKEFYYEGGIVSYVEHLN
SSRGVLHDPIYAEAEQDGISVELALQYNDGFASNIYSYANNIHTYEGGTHESGFKTGLTR
VINDYARKNNMFRENDPNLTGDDVREGLTVIISIKHPDPQFEGQTKTKLGNSEARTVTDA
LFSENFGKFLLENPNVARIIVEKGLMASRARMAAKKARELTRRKSALEVSNLPGKLSDCS
SKDPAISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEVRSMI
TALGTGIGEEFDITKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRPLLEHGYIYIAQP
PLYQIKQGKKVYYTFSDKELDAKLMELPDSPKPGIQRYKGLGEMNPEQLWETTMNPEGRT
MLQVSLEDAIGADETFSMLMGDDVEPRRNFIQENAHYVQNLDV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgaaattcaaagagggaaagaacaagcttatgatgaaaaccagatacaagtc
ttagaagggctcgaagcggttcgtaaacgtccgggtatgtacatcggatctacgaacgag
aaagggctgcatcacctcgtgtgggaaattgtcgataatagtatcgatgaagcgatggcc
ggtcattgtgataagatccaggtaatgatcgaagaggataacagtattactgtcaccgat
aatgggcgcggtattcccgtcggtatccaggagaaaacagggcgtccggcggtcgaggtg
atcatgaccgtgctgcacgcaggaggtaagttcggggggggcggatataaagtctccggc
ggacttcatggtgtcggagcatccgttgtgaatgccctctccgactatctggaagtgtat
gttcatcgggatggtaacctgtaccatcaggattacaaacacggcgtaccacaaaaagac
gtggcacaaataggcacgacagataaaaacggaacgatgatccacttccgtccggatcac
gagatattcgatgaaacgcaggaatacaacttcgatacgctcgccaatcgtctgcgtgaa
ctagcctttcttaatcggggactgacgattaccatcgaagacaaacggaccgattacgac
aacgggacaaaggaattctattacgaaggcggtatcgtttcgtatgtcgaacacctgaac
agcagccgcggcgttctccacgatcctatttatgcggaagcggagcaggatggcatttcc
gtggaactggctcttcagtacaacgatggatttgcgagtaatatctattcttatgccaat
aacatccatacgtatgaaggcgggacgcacgagtccgggttcaaaaccggactgacacgc
gtcattaatgactatgcccgtaaaaacaatatgttccgggaaaacgatccgaacctgaca
ggagatgatgtccgtgagggattgacggtgattatttccattaaacacccggatccacag
ttcgaaggacagacgaagacgaagcttgggaacagtgaagcccgtacggttacagatgct
ttgttctcggagaatttcggcaagttccttctcgagaacccgaacgtagccaggattatc
gtcgaaaaaggactgatggcctcgagagcccgtatggctgcgaagaaagcccgggaactt
acgagaagaaagagtgccctcgaagtctccaatcttccaggtaagctttcggattgttca
tcgaaagacccggcgatttcagaactttatatcgtagagggagattccgccgggggatcc
gctaaacagggacgggatcgtcatttccaggctattctgcctctgcgcggtaaaatcatc
aacgtagagaaagcgagacttgataagattttatcgaataacgaagttcgatcgatgatt
acagcgctcgggacaggtatcggagaagaattcgacatcaccaaggcccgctatcataaa
gtcgtcatcatgacagatgcggatgtggacggtgctcatatcagaacgctgttgcttacg
ttcttctacagatatatgaggccgctgcttgagcatggctatatatatatcgcccagcca
ccgctctatcagatcaaacaggggaaaaaggtttactacaccttctccgacaaggaactg
gatgctaaattgatggagctcccggattctccgaagcccggcatccagcggtacaaaggt
cttggggaaatgaaccctgaacagctctgggaaacgacgatgaatccggaaggtcgtacg
atgcttcaggtgagtcttgaagatgcgatcggtgcggatgagacgttcagtatgctgatg
ggcgatgatgtcgaaccaagaaggaatttcatacaggaaaatgcacattacgtccagaat
ctggatgtgtaa
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