Salimicrobium sp. PL1-032A: U0355_02150
Help
Entry
U0355_02150 CDS
T10562
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
sapl Salimicrobium sp. PL1-032A
Brite
KEGG Orthology (KO) [BR:
sapl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
U0355_02150 (tnpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
DUF7575
C1_1
Zn_Ribbon_1
Zn_ribbon_IS1595
Zn_ribbon_ZPR1
RUBY_RBDX
DmmA-like_C
Motif
Other DBs
NCBI-ProteinID:
WVR02098
LinkDB
All DBs
Position
complement(405545..406666)
Genome browser
AA seq
373 aa
AA seq
DB search
MVHKAYKFRIYPNKQQAILIAKTIGCSRFVFNHFLDAWQSTYRETGKGMSYYACSKQLTK
EKKNYEWLQEVDSTALQNSLKSLATSFDRFFKKLGHAPRFKSKKNNRQSYTTQSNHGNIK
VVGNKVQLPKLGWVKFAKSREVEGRILSATVRRNPSGKHFVSILVETEVERLPKTKSSIG
IDLGLKDFAILSNGQTYANPRYLRKSEDKLAKAQRILSRRVKGSSNWHKQRVKVASLHEK
ITNARKDYLHKVSTDIIKSHDVIGVEHLQISNMLKNRKLSKSISDVSWSMFTDMLKYKAE
WYGKHLILISKTFASSQLCSHCGYQNKDVKNLAVRTWECPNCGIHHDRDLNASFNILKEA
RRLLPTVGTTGLA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggttcacaaagcatataagttccgtatctatcccaataaacaacaagctatcttaatc
gcaaaaaccatcggctgttcccgctttgtcttcaaccatttcctcgacgcatggcagtcg
acctacagagaaacaggcaaggggatgtcctactatgcctgttcgaaacaattgaccaaa
gaaaagaagaactatgaatggctacaggaagtcgacagcacagctcttcaaaactcgtta
aagagtcttgcgacctcctttgaccgcttttttaagaaacttggtcatgcaccacgtttc
aaatctaagaaaaataaccgccaatcctacacgactcaatccaaccatggcaacattaaa
gttgtaggtaataaagtgcagctccccaaactaggctgggtcaagtttgctaagagtcgt
gaagtcgaagggcgtatcctgagcgcaaccgttcgacggaatccttcgggtaaacatttc
gtctccatactcgttgagacagaagtcgaaagactaccaaaaaccaagtcttcgatcggt
atcgatctgggtttaaaagacttcgctattctttcgaatggacaaacatacgcaaaccca
cgctaccttcgtaaaagcgaagataaattagctaaggctcagcgcatcctttcccgaaga
gtaaagggttcttcgaactggcataaacagcgtgtcaaagtagcgagtcttcacgaaaag
attacgaatgctcgcaaagactatctccataaagtttctaccgacattatcaaaagccac
gatgtgatcggtgtagaacatcttcaaatttcgaatatgctcaaaaaccgtaaactatct
aaatctatcagcgatgtgagctggtccatgttcacagatatgctcaaatacaaggcggaa
tggtatgggaaacatttgatccttatatcaaagacattcgccagttcacagctgtgctcc
cattgcggatatcaaaacaaagacgttaagaatcttgccgttcgaacgtgggaatgtcca
aattgcggcattcaccacgaccgagatttgaacgcaagcttcaatattttgaaggaagcc
agaagactccttccaaccgtcgggacgacggggctcgcctaa
DBGET
integrated database retrieval system
