Salimicrobium sp. PL1-032A: U0355_12425
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Entry
U0355_12425 CDS
T10562
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sapl Salimicrobium sp. PL1-032A
Pathway
sapl03420
Nucleotide excision repair
sapl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sapl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U0355_12425 (pcrA)
03430 Mismatch repair
U0355_12425 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sapl03400
]
U0355_12425 (pcrA)
Enzymes [BR:
sapl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0355_12425 (pcrA)
DNA repair and recombination proteins [BR:
sapl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U0355_12425 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
U0355_12425 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DUF87
ResIII
T2SSE
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WVR01498
LinkDB
All DBs
Position
complement(2406984..2409194)
Genome browser
AA seq
736 aa
AA seq
DB search
MTQSTHALLKGMNEPQQKAVAHTEGPLLVMAGAGSGKTRVLTHRIAYLIQEKGVNPWNIL
AITFTNKAAREMKERVQVLVGPGVESIWMSTFHSMCVRILRRDIDRIGMDRNFSILDASD
QLTVIKQVLKDLELDPKNWNPRSMLGAISNAKNELLAPEEFEKNAAGYREEQVAAIYKGY
QKKLSKNQSLDFDDLIMKTLVLFEKMPEVLEYYQRRFQYIHVDEYQDTNHAQYLLVQKLA
DKFKNLCVVGDSDQSIYRWRGADITNILSFEENYPDATTILLEQNYRSTEVILDAANHVI
DNNSGRKPKRLWTDNYGGEKIHYHEAGTEREESFFIADKIESLITDGDFGYDDVAILYRT
NAQSRTIEETFMKANIPYQMIGGTKFYDRKEIKDLLAYLRLISNPNDDLSFERVVNEPKR
GIGKTSIEKMQAYAAAHDISLFDTAAEIDFVGVSAKAAKAIIQFRKMIDNWTKQQEFLSA
KDLVEEVLETTGYEEMLRNDKTLEAQSRLENIEEFKSVTMNFEQESEDKSLVAFLTDLAL
VADIDKVDEEENDTAVTMMTLHSAKGLEFPVVFLIGLEENIFPHSRSIMDEEEMEEERRL
AYVGITRAEKKLFMTNAKMRTLFGKTNMNPVSRFIGEIPEEFLEGKAETEPLPFAKKKTI
EPDRPVQKRRAKKTTGASGAESESWQPGDKAVHRKWGEGTVVKVQGEGKDTELDIAFPAP
EGVKRVLARFAPITKA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaatcgacacatgcgttgttgaaaggaatgaacgaaccgcagcagaaggcggtg
gcacatacggaaggaccgcttctcgttatggcgggagccggaagtgggaagacgcgggtg
cttacacaccgcatcgcctatctgattcaggaaaaaggggtcaatccgtggaatatactt
gcgattacgttcacgaataaagctgcacgcgaaatgaaggaaagagtgcaagtgctcgtg
ggaccgggggtggaaagcatctggatgtccacgttccactcgatgtgcgtacggattctg
agacgtgatatcgatcggatcggcatggatcgtaacttttcgattctggatgcgagtgat
cagcttacggtcatcaaacaggtactgaaggatcttgagctcgatccgaagaactggaat
ccgcgctcgatgctcggggcgatcagtaatgcgaagaacgaactgttagcgccggaggaa
ttcgagaagaacgcagccggctaccgggaagaacaggtggcggcaatctacaagggctat
cagaagaagctgtcgaagaaccagtcgctcgatttcgacgatctgatcatgaaaacactc
gtgctgtttgagaaaatgccggaggtgctcgaatattaccagcggaggttccaatacatc
cacgtcgacgagtatcaggatacgaaccatgcccagtatctgctcgtccagaaactcgca
gataaattcaagaatctgtgtgtcgtaggcgactccgaccagtcgatttatcgctggcgc
ggggcggatattacgaatatcctgtcgtttgaagagaactacccggatgcgacgacgatt
cttctcgagcagaactaccgctcgacggaggttatcctcgatgcggcgaaccacgtcatc
gacaacaacagcggccggaaaccgaagcggctgtggacggataattacggcggcgagaag
atccattaccacgaagcggggaccgagcgggaagagagtttcttcatcgctgataaaata
gaatccctcatcaccgacggggatttcggatacgatgatgtcgcgatcctgtaccggacg
aatgcccagtcccgtaccatcgaggaaacattcatgaaagcgaatatcccgtaccagatg
atcggtggtacgaagttctacgaccggaaagagatcaaggatctgcttgcatacctgaga
ctgatttcgaacccgaatgatgatttgagttttgagcgtgtcgtcaatgagccgaaacgc
ggcatcgggaaaacgagtatcgagaagatgcaggcgtatgctgcggctcatgatatctcc
cttttcgatacggcggccgaaatcgacttcgtcggcgtcagcgccaaagccgcgaaagcg
atcatccaattccgtaaaatgatcgacaactggacgaagcagcaggaattcctgtctgcg
aaagatctcgtcgaagaggtgttggagacgaccgggtacgaagaaatgcttcgtaacgat
aagacgcttgaggcgcagtcccgacttgagaacatcgaagaattcaaatcggtgacgatg
aacttcgaacaggaaagtgaagataaatcactcgttgctttcctgacggatcttgcgctc
gtagcggatatcgataaagtggatgaggaagagaacgacacagccgttacgatgatgacg
ctgcattctgcgaaagggctcgagtttccggtcgtcttcctcatcgggctcgaggagaac
attttccctcacagccgctccatcatggatgaagaggaaatggaggaagaacggcgtctc
gcttacgtaggaatcacccgtgccgagaagaaactgttcatgacgaatgcgaagatgcgt
acgctgttcggaaagacgaatatgaacccggtaagccggttcatcggggaaattcctgaa
gagttcctcgaaggaaaagcggaaacagagccccttcctttcgctaagaagaagacgatc
gaaccggaccgccctgtacagaaacggagagcgaagaagacgacgggcgcttccggggcg
gaaagcgaatcctggcagccgggcgataaagctgtccataggaaatggggcgaaggaacg
gttgtgaaagtgcagggagaaggcaaagacacggaactggatattgcatttccggctccg
gaaggtgtgaagcgtgtattggcacgatttgcgccgatcactaaggcgtaa
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integrated database retrieval system
