Scedosporium apiospermum: SAPIO_CDS0966
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Entry
SAPIO_CDS0966 CDS
T06367
Name
(RefSeq) ATP-dependent rRNA helicase SPB4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
sapo
Scedosporium apiospermum
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sapo03009
]
SAPIO_CDS0966
Enzymes [BR:
sapo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAPIO_CDS0966
Ribosome biogenesis [BR:
sapo03009
]
Eukaryotic type
Pre-60S particles
Helicases
SAPIO_CDS0966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
27719118
NCBI-ProteinID:
XP_016645910
UniProt:
A0A084GFJ9
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MSKQKSGIDPRSWDAVNIPDWMKSYASSMGYRKMTAVQASCLPQFLERGADVVVEAVTGS
GKTLAFLMPTVKKVLGIEDLKRHHVAAIVVSPTRELATQIHSVLLSMLEFHEPSAQLLPY
LQEEEKRPDAASPVVVPQLLVGGTTTPAQDLAFFMRHSPNLLVATPGRLVELLASPYVHC
KGAAGFEVLILDEADRLLDLGFKQDLQRILGHLPKQRRTGLFSASVSDAVSEIIRVGLRN
PVKITVRVKSLKDGGVIEDRKVPASLQMSYLTGPASHKLPLLCQLLEKLQQRPQRSMIFL
STCAAVDYFQHVLPMLLPEGFSLLCLHGKHPAKVREKNFNRFLTCVSPTILLTTDLASRG
LDFPSVDLVVQIDPPSDTKAFIHRCGRAGRAGRKGLAVVMLHEGREEEYVTLLGVRQTPI
SPLQKPAVKVSANDAASASERIRQLLRADRALHDKAQKAFVSWVRSYANHQAASIFRLAD
LDWADLGNAWGLLRLPKMPEVKKWEGDRTLGQEVDWDTYAYKDKAREQQRKEALEAEKAA
RANGEVPDSSKYSKKRKKKNEAWSGKQEKDDVRSARREKRRKRKEAETDAKMTEEEKVKK
MELNELIEEVRRRNMAVKEVKVKKGAEAEEEFAGFDD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaaaagtctggcattgaccctcggtcctgggatgccgtcaacatcccagac
tggatgaagtcctatgcctcgagcatgggctacaggaagatgacggctgtgcaagccagt
tgtcttcctcagttcctggaacgcggagccgacgttgtcgttgaggctgttactggaagc
ggaaagactcttgccttcctcatgcccaccgtgaaaaaggtcctcggtatcgaagacctc
aaacgacaccacgtagccgccatcgtcgtgagccccacccgagagctcgctacccagatc
cattccgtcctcctctccatgctcgagttccacgaaccctcagcccagcttcttccctat
ctccaggaagaagaaaagcgacccgatgcggcgagccccgtagtggtgccacagctactc
gtgggcggaacgacgacgccggcgcaagatcttgccttcttcatgaggcattctccgaac
ctgctcgttgctacgcccggtcgactcgtcgagcttctggcgtctccctacgtccattgt
aagggagccgccggcttcgaagttctgatcctcgatgaggccgaccgcctcttggacctc
ggtttcaagcaagacttacaaagaatccttggtcacctcccgaagcagcgccggaccggt
ctcttcagcgcctccgtgtccgatgccgtgagcgagattattagggtgggacttaggaac
cctgtgaaaattacagtcagggtaaagagcctgaaggacggcggtgtcatcgaggacaga
aaggtgccggcgagtctccagatgtcatacctcacggggcccgccagccacaagctcccg
ctcctctgccaactcctcgagaagctccagcagcgaccgcagcggagcatgatattcttg
tcgacatgcgccgcggtcgactacttccagcacgtactccccatgcttctgccggaaggg
ttttccctcctctgcctccacggcaagcacccggctaaggtcagagaaaagaactttaac
cgcttccttacctgcgtgtcgcccacgattctcctcaccaccgacctcgcctctcgcggt
ctcgactttccctccgtcgatctcgtcgtccagatcgaccctccgtcagacacaaaagct
ttcatccaccgatgtgggcgcgcaggaagggccggtcgcaaaggattggccgtggtgatg
ctccacgaaggccgtgaagaggaatacgtcaccctgctcggggtgaggcaaacgccgatt
tcccctcttcagaagcccgccgtcaaggtttccgcaaacgatgcggcctctgcgtccgag
cggatacgccagctcctccgcgccgaccgcgccctgcacgacaaggcgcaaaaggccttc
gtctcctgggtccgcagctacgccaatcaccaggccgcatccatattccggctcgcggat
ctagactgggccgatctcggcaacgcctggggtctcctccggctacctaagatgcccgag
gtcaagaagtgggaaggcgatcggacgctgggccaggaagtggactgggacacgtacgcg
tacaaagacaaggcacgagagcagcagcgcaaagaagcgctagaggccgagaaagcggcc
agggcgaacggcgaggtgccggattcgtccaagtattctaagaagaggaagaagaagaat
gaggcgtggagcggcaagcaggagaaggatgatgtgcggtcggcgaggagggagaagagg
aggaagaggaaggaggctgagacggatgcgaagatgactgaggaggagaaggtgaagaag
atggagttgaatgagttgattgaggaggtgaggaggcggaatatggcggtgaaggaggtt
aaggtgaagaagggtgcggaggcggaggaggaatttgctgggtttgatgactga
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