Scedosporium apiospermum: SAPIO_CDS0973
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Entry
SAPIO_CDS0973 CDS
T06367
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIO_CDS0973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS0973
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SAPIO_CDS0973
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
SAPIO_CDS0973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
27719125
NCBI-ProteinID:
XP_016645915
UniProt:
A0A084GFK4
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MPSVQTLLFSPAELAYLHASLSLPTPIRPDGRKPTQFRPLTAETGILPATNGSARVCFAD
GTEAIVGVKAEIQKTIDPRATSLPVYTASRGEQSRTEDDEGRAPEPAASNEWLEITVEIP
GYRDDDATTVFLASMLSEALVADGEFAKKLVINRRFHWKLYLDIFLISPPLSYPLPLLSL
TTHLALLSTRLPRLKSEGDEDPMFDDDWEAATYLYPPVSSASSSRPPITLLVVAIGDNIF
FDPSSEELAVAEVALAISVAECPNVCKGADVMEIDSSRTFKMLSMRSIDPPSRLTPPGIP
DVENPTTGTSGAATPSKKPQQKAQTSKGVWRAPLGGAKFGMIQLMIQQVMGKGGVANEVL
DGVAGVDLS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgccatcggtccaaacgctccttttctccccagcggagctcgcctatcttcacgcctcc
ctctccctcccgaccccaatccgccccgatggccgcaagccaacccagttccgcccatta
accgccgaaacgggcattctaccggccaccaacggaagcgcgagggtatgttttgccgac
ggcaccgaagcgatcgtgggcgtcaaggcagagattcagaagaccatcgacccgcgagcg
accagccttcctgtctacactgcgtctaggggagagcaatcgaggacggaggatgacgag
gggcgagcgccggagccggcggcgagtaacgagtggcttgagattaccgtagagatacca
ggatacagggatgatgacgcgacgacggtgttcttagcgtcgatgttgagcgaggccctg
gtcgccgatggagagtttgcgaagaagcttgtgataaatcggaggtttcactggaaactc
tacctcgatatattcctcatctcccctccactgtcatatcctctacctctcctctcctta
acgacacatctcgcccttctctccacgaggttaccgagactcaaatcagaaggcgatgag
gaccccatgttcgacgacgattgggaggccgccacgtatctctacccaccggtctcgtcc
gcttctagttccagaccaccaatcacacttctcgtcgtagctataggtgacaacatcttc
ttcgacccatcaagcgaggaacttgctgtcgccgaggtcgcgctagcgatatcagtcgcc
gagtgccccaatgtgtgcaagggcgcagatgtaatggaaatcgattctagccgcactttc
aagatgctctctatgaggtcgattgaccctccctcgcggctaacacctcctgggatccct
gatgtggagaaccctaccacgggtacctctggagcggcgacgccgagcaagaagccgcag
cagaaggcgcagacctctaaaggagtgtggagggcgcctttgggaggcgcgaaattcggc
atgatacagttgatgatacagcaggttatggggaagggtggtgttgcgaatgaggtgttg
gatggtgttgctggtgtggatttgagttag
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integrated database retrieval system