KEGG   Scedosporium apiospermum: SAPIO_CDS0973
Entry
SAPIO_CDS0973     CDS       T06367                                 
Name
(RefSeq) hypothetical protein
  KO
K12589  exosome complex component RRP42
Organism
sapo  Scedosporium apiospermum
Pathway
sapo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sapo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAPIO_CDS0973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sapo03019]
    SAPIO_CDS0973
Messenger RNA biogenesis [BR:sapo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SAPIO_CDS0973
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     SAPIO_CDS0973
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 27719125
NCBI-ProteinID: XP_016645915
UniProt: A0A084GFK4
LinkDB
Position
Unknown
AA seq 369 aa
MPSVQTLLFSPAELAYLHASLSLPTPIRPDGRKPTQFRPLTAETGILPATNGSARVCFAD
GTEAIVGVKAEIQKTIDPRATSLPVYTASRGEQSRTEDDEGRAPEPAASNEWLEITVEIP
GYRDDDATTVFLASMLSEALVADGEFAKKLVINRRFHWKLYLDIFLISPPLSYPLPLLSL
TTHLALLSTRLPRLKSEGDEDPMFDDDWEAATYLYPPVSSASSSRPPITLLVVAIGDNIF
FDPSSEELAVAEVALAISVAECPNVCKGADVMEIDSSRTFKMLSMRSIDPPSRLTPPGIP
DVENPTTGTSGAATPSKKPQQKAQTSKGVWRAPLGGAKFGMIQLMIQQVMGKGGVANEVL
DGVAGVDLS
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgccatcggtccaaacgctccttttctccccagcggagctcgcctatcttcacgcctcc
ctctccctcccgaccccaatccgccccgatggccgcaagccaacccagttccgcccatta
accgccgaaacgggcattctaccggccaccaacggaagcgcgagggtatgttttgccgac
ggcaccgaagcgatcgtgggcgtcaaggcagagattcagaagaccatcgacccgcgagcg
accagccttcctgtctacactgcgtctaggggagagcaatcgaggacggaggatgacgag
gggcgagcgccggagccggcggcgagtaacgagtggcttgagattaccgtagagatacca
ggatacagggatgatgacgcgacgacggtgttcttagcgtcgatgttgagcgaggccctg
gtcgccgatggagagtttgcgaagaagcttgtgataaatcggaggtttcactggaaactc
tacctcgatatattcctcatctcccctccactgtcatatcctctacctctcctctcctta
acgacacatctcgcccttctctccacgaggttaccgagactcaaatcagaaggcgatgag
gaccccatgttcgacgacgattgggaggccgccacgtatctctacccaccggtctcgtcc
gcttctagttccagaccaccaatcacacttctcgtcgtagctataggtgacaacatcttc
ttcgacccatcaagcgaggaacttgctgtcgccgaggtcgcgctagcgatatcagtcgcc
gagtgccccaatgtgtgcaagggcgcagatgtaatggaaatcgattctagccgcactttc
aagatgctctctatgaggtcgattgaccctccctcgcggctaacacctcctgggatccct
gatgtggagaaccctaccacgggtacctctggagcggcgacgccgagcaagaagccgcag
cagaaggcgcagacctctaaaggagtgtggagggcgcctttgggaggcgcgaaattcggc
atgatacagttgatgatacagcaggttatggggaagggtggtgttgcgaatgaggtgttg
gatggtgttgctggtgtggatttgagttag

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