Scedosporium apiospermum: SAPIO_CDS1001
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Entry
SAPIO_CDS1001 CDS
T06367
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SAPIO_CDS1001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sapo03021
]
SAPIO_CDS1001
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS1001
Transcription machinery [BR:
sapo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SAPIO_CDS1001
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
SAPIO_CDS1001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
VHS
zf_PCFS4
Zn-C2H2_12
zf_UBZ
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
27719163
NCBI-ProteinID:
XP_016645938
UniProt:
A0A084GFM7
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MSYENAAAEVAEDFKTALEDMTSISRIEIMNLCQIARENTEHAFEISEVLVAHINRTAPQ
KKLAALYVLDAIVKNVGTPYTLYVAPKLFSTFMEAYARVEHPVRRKMEEMLKTWKGPVPG
SMDTKPVFPPDVVKPIENALIKAHTSAMQTLQQHRKTQPHILGRPPPSAPHRNTPTPPGM
PHGTHGHPYAHHAAPDVNGTGTPQHQTPPFVPPRSGTQSMPPTHGAHAYYGTPQQPGYVA
GVNADVLNKDIEDLVLATRVEYAQNPHDGSIPTRLKALMDLQAIVQAKNLPQDQLVLVKK
QVDELAVKMRVPQVGSSTTSSTPNYQHQHHVSLPTSVAPPPSTSSAGTTPVPLPLAQVPT
PVPTASAPVPAQPQGHVTIDSLLGKGALAALLAQQAERSARSTPAPAPPATHAPPQPPPV
MPAAAPPQAQDPMALIHQLRQAGLLGAAGHAGAPVAPPPAPAVPSIPTRAMQSAALASLP
PVLARVLSPMKAWAPPPPPADSRELSWNLASLQVVRPYLFPALYGELGPQCSQCGRRFKA
DAEGKKKKTAHMDWHFRVRQRMAEAEKRGQYRSHYVPKHDWIKSREEVDLDYSAEEKDTT
TSEEASKPPEQQYIRVPDPSSGISKVCPICQEQFENKWLDSAQEWVWLDAKMVGNRAYHA
SCHAEATKDRDRATTPSFGGGGRGFTPEPVLGKRKADVSADSKTLKKGRS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgaaaatgctgccgccgaggtggcggaggatttcaagacggcgctggaggac
atgacctccatcagtcgaatcgagattatgaacttgtgccagattgcccgcgagaatacg
gagcatgcctttgaaatctctgaagttcttgtggcccacataaaccggactgctcctcaa
aaaaagttggccgccctatacgtgctagatgccatagtcaagaatgtcggcacaccgtac
acactctatgtggcgcccaagctgttctcgaccttcatggaggcttatgcccgggtagag
cacccggtccggcgcaagatggaggagatgctgaagacgtggaaaggacctgtgccgggc
tctatggataccaagccggtcttcccccccgacgtcgtgaaacccatcgagaatgccctc
atcaaggctcatacctccgccatgcagacacttcaacagcaccgtaagactcaaccgcac
attctcggccgtcctccacctagcgcgccgcaccgcaacacccctacgcctcccggcatg
ccccatggtactcacggccacccctacgctcatcacgccgctccagacgttaatggaacg
ggcaccccccagcatcagacgccccccttcgtgccgccaaggtccgggactcagtctatg
cctcccactcacggagcgcatgcttattatggcacgccgcagcagccaggatatgtggca
ggggtgaacgcagatgtgttgaataaagacatcgaagacctcgtccttgcaacgcgcgtg
gagtatgcgcagaatccgcatgatggtagtattccaacgagactcaaggcgctcatggac
ttgcaagcaatcgtgcaagccaagaacctgccgcaagaccaactcgtgctagttaagaaa
caagtagatgaactcgccgtgaagatgagagttccacaagtaggcagcagcaccaccagc
tcgacgccaaactaccagcaccagcaccacgtatctctacctaccagcgtagcccctccc
ccttctacatcttcggcgggcacgacgcccgtgcctctgccgctggcgcaagtgccgaca
ccagtaccgacagcttcggcccccgtgcccgcgcagcctcaaggtcacgtaacgattgat
tccctcctaggaaagggagctttggctgctcttctggcgcagcaggccgagcgatctgcg
cgttcgactccggctcccgcgccgccggccacacacgccccaccgcagccgccacccgtg
atgcctgcagccgctcctccacaagcacaggaccctatggccttaattcaccaactgagg
caggcgggccttctaggcgcggctggacatgcgggcgcgccggttgccccacctcctgct
cccgcggtgcctagtatccctactcgggcgatgcaatccgccgccctcgcctctctgcct
ccggtgcttgcgagagtgttgtcgccgatgaaggcatgggctccgcctcccccgccagcc
gactcgagggaattgtcctggaacctggcctccctccaagtagtacgaccttacctattc
ccagctttgtacggagaacttggaccccaatgtagccagtgtggtcgacgattcaaggcg
gacgcagaagggaagaagaagaagacggcgcatatggattggcatttccgcgtgcggcaa
cgcatggccgaggcagagaagcgcgggcaatatcgaagccactacgtacccaaacacgac
tggataaaatcgcgcgaggaagtagacctcgactactccgccgaagaaaaagacaccaca
acctccgaagaagcctccaaaccccccgagcagcaatacatccgcgtgcccgacccatcc
tctggcatcagcaaagtctgccccatctgccaagagcagttcgagaacaagtggctcgac
tcggcgcaggaatgggtgtggctcgacgccaagatggtggggaatcgcgcgtaccacgcc
agctgccacgccgaagcgaccaaggatcgagatagggcgacgactcctagttttggtggc
ggagggagagggttcacgcccgagccggtgctggggaagaggaaggccgatgtgagtgct
gactctaagaccctgaagaagggtaggagctaa
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