KEGG   Scedosporium apiospermum: SAPIO_CDS10023
Entry
SAPIO_CDS10023    CDS       T06367                                 
Name
(RefSeq) hypothetical protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
sapo  Scedosporium apiospermum
Pathway
sapo03013  Nucleocytoplasmic transport
sapo03015  mRNA surveillance pathway
sapo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sapo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SAPIO_CDS10023
  09122 Translation
   03013 Nucleocytoplasmic transport
    SAPIO_CDS10023
   03015 mRNA surveillance pathway
    SAPIO_CDS10023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sapo03019]
    SAPIO_CDS10023
   03041 Spliceosome [BR:sapo03041]
    SAPIO_CDS10023
Enzymes [BR:sapo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SAPIO_CDS10023
Messenger RNA biogenesis [BR:sapo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SAPIO_CDS10023
Spliceosome [BR:sapo03041]
 Complex C
  Other components
   EJC/TREX
    SAPIO_CDS10023
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    SAPIO_CDS10023
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 DUF4844
Other DBs
NCBI-GeneID: 27719178
NCBI-ProteinID: XP_016639131
UniProt: A0A084FW70
LinkDB
Position
Unknown
AA seq 434 aa
MSNEEDLIDYSDEEIQTTEPTTAAANGKKGDLAAGGSVDKKGSYVGIHSTGFRDFLLKPE
LLRAIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLTTLQQVEPVNGEVS
VLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDVEVIKNKDTCPHIIVGTP
GRLNALVRDKILRLGSVRIFVLDECDKMLDQVDMRRDVQDIFRATPQQKQVMMFSATLSE
EVKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYISLEEREKNRKLNELLDELQFNQVIIF
VKSTLRATELDKLLRECNFPSISVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDI
ERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSSDQDKEVLKSIEKRFEVALPE
FPKEGIDASTYMAS
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgtctaacgaggaagatctcatcgactactccgacgaggagatccagaccacggagccg
accaccgcggccgccaacggaaagaagggcgacctcgccgccggcggtagtgtcgataag
aagggcagttacgtcggtatccactcgaccggcttccgcgatttccttttgaagccagag
cttctccgcgctattggcgactgcggattcgagcatccctcggaggtccagcaaacctgt
attccccaggccctcctcggaggtgatattatctgccaggccaagtccggtctcggaaag
actgcagtctttgtcctgaccacccttcagcaagtcgagcccgttaatggcgaggtctcc
gtcctcgttatgtgccacactcgcgagctggctttccagattcgcaacgagtacaaccgt
ttcagcaagtatatgcccgacatcaagactggcgtgttctacggtggtactccaatccag
aaggatgtcgaggtcattaagaacaaggacacttgccctcacatcatcgtcggaacccct
ggccgtctcaacgccttggttcgcgacaagattctccgcctcggaagtgttcgtatcttt
gtccttgatgaatgcgacaagatgcttgaccaagttgatatgcgacgtgatgttcaggac
atcttccgtgctactccccagcagaagcaggtcatgatgttctcggccaccctttctgag
gaagtcaagcccatctgccgcaagttcatgcagaaccctacggagcattacgtcgacgag
gacaccaagctcaccctccacggtcttcagcaatactatatctcgctcgaggaacgtgag
aagaaccgcaagcttaatgagttgttggatgagctccagttcaaccaggtcatcatcttt
gtcaagagcacgcttcgtgctaccgagctcgataagcttttgcgcgaatgcaatttcccc
tccatctcggtccactctggcgtcagccaagaggaacgtatccgccgatacaaggagttc
aaagaattcaacaagcgaatctgcgtggccactgacgtattcggacgaggtatcgacatt
gaacgcatcaacttggctatcaactacgatctcccagctgatgccgattcgtacctccac
cgtgtcggtcgtgccggtcgtttcggtaccaagggtcttgccatctctttcgttagcagc
gaccaggacaaggaggtactcaagtcgatcgagaagcgcttcgaagttgctcttcctgag
ttccccaaggaaggcatcgatgccagcacttacatggcgtcctaa

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