Scedosporium apiospermum: SAPIO_CDS1021
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Entry
SAPIO_CDS1021 CDS
T06367
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03020
RNA polymerase
sapo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAPIO_CDS1021
09124 Replication and repair
03420 Nucleotide excision repair
SAPIO_CDS1021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sapo03021
]
SAPIO_CDS1021
03400 DNA repair and recombination proteins [BR:
sapo03400
]
SAPIO_CDS1021
Transcription machinery [BR:
sapo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
SAPIO_CDS1021
DNA repair and recombination proteins [BR:
sapo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SAPIO_CDS1021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
27719383
NCBI-ProteinID:
XP_016645952
UniProt:
A0A084GFP1
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MDLDHLMLNGEQGGPSVKISAASRSRVDFEMTGADLSFANSIRRVIQAEVPTLAIDLVEI
EINSSVLADEFISHRLGLIPLVSKDVKDLRYSRDCDCDQYCDACSVRLSLHAKCMSDEIL
KVYARDLIIDSSRKSADLGTPVITDPEGHGSLICKLRQGQELKLQCIAKKGVAKEHAKWM
PTAAVGFEYDPHNKLHHLDLWYEEDAQKEWPKSKYAEWEEPPQEGEPFDYNAVPDRFYFE
VEGVGVLDPDEIVQGGISVIQQKIAELIHVISGRGPENAVEDEFGGPRSPDMAMDGNPWQ
DTAYATTPYGNAGNQSTWGGAATTPYATTTPYGNSGQSGWS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgaccatttgatgctcaatggcgagcaaggcgggccatccgtcaaaatctca
gccgccagccgctctcgagtagatttcgaaatgacaggcgccgacctctccttcgcaaac
tccatccgccgcgtaatccaagccgaagtccccaccctcgccatcgacctcgtcgagatt
gaaatcaacagctccgtcctcgccgacgagttcatctcccaccgcctcggtctcatcccc
ctcgtgtccaaggacgttaaggacctccggtactcgcgagactgcgactgcgaccagtac
tgcgacgcatgcagcgttcgtctcagcctccacgctaagtgcatgtccgacgagatcctc
aaggtctacgcgcgcgacctcatcatcgatagcagtcgcaagagcgccgatctcgggacg
ccggtcattacggatcccgagggtcatggttcgcttatttgtaagcttcgtcaggggcag
gagttgaagttgcagtgtattgcgaagaagggcgtggcgaaggagcatgcgaagtggatg
cctacagcggctgtgggctttgagtatgatcctcacaataaattgcatcacttggatctt
tggtacgaagaggatgctcagaaggaatggcccaagagcaagtacgcggagtgggaagag
ccgcctcaagagggcgagcccttcgactataacgcggtacccgaccgtttctacttcgag
gtggagggcgtaggcgtcttagaccccgacgagattgtgcagggaggaattagtgttatc
cagcaaaagatcgccgagttgatacacgtcataagcggtagaggacccgagaacgccgtt
gaggacgaatttggtggtcctaggagtcccgacatggccatggacgggaacccgtggcaa
gacactgcctacgcgactactccttatggtaatgcggggaatcagagcacttggggaggg
gctgcgacgacgccttatgccacgactacgccgtatggaaattcggggcagagcggatgg
agttga
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