Scedosporium apiospermum: SAPIO_CDS10232
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Entry
SAPIO_CDS10232 CDS
T06367
Name
(RefSeq) ATP-dependent RNA helicase DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIO_CDS10232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS10232
03036 Chromosome and associated proteins [BR:
sapo03036
]
SAPIO_CDS10232
Enzymes [BR:
sapo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAPIO_CDS10232
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SAPIO_CDS10232
mRNA degradation factors
5'-3' decay
Decapping complex
SAPIO_CDS10232
Chromosome and associated proteins [BR:
sapo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
SAPIO_CDS10232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
API5
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
27719408
NCBI-ProteinID:
XP_016638709
UniProt:
A0A084FUZ8
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MTDALADKLNTIQIGYASNLSPPALQRHPPLSVDSLTSPSDGTNDDWKKALKIPAKDGRK
QTEDVTNTKGLEFEDFGLKRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTG
KTAAFVIPALEKINPKVSKIQCLILVPTRELAMQTSHVCKSLGKHLGINVMVTTGGTGLR
DDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSQEFTPVIEQLLQF
HPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELTLRGITQYYAFVDEKSKVHCLN
TLFSRLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCR
NLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNL
YNIERDLGTEIQPIPQTIDKSLYVYENPETIPRPISTLKPGVNSTAKPNAPQNFNGQSQD
QAQPAQQRSQHTHHQQQQPAGPAPNVNWQTQNLTQNGPSHYQSNRGRGRGRGYHGQGRGR
GSYNGGYGRGRGQGPAIQQS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcgcttgcagataagcttaataccattcagattgggtatgcttcgaatctg
tcgcccccggctctccagagacatccccctttgtccgtcgactcgctaacgagccctagt
gacggcaccaacgatgattggaagaaggcgttaaagatacctgccaaggatggcaggaaa
cagactgaggacgttacgaacaccaaaggcctcgagttcgaagacttcggccttaagcga
gatctactgatgggcatcttcgaagccggattcgagaagccctcccccatccaagaagaa
gccatccccgtcgctctcactggacgagatatccttgctcgagccaagaacggcaccgga
aagacagccgctttcgtaatccccgccctcgaaaagatcaaccccaaggtctccaagatt
caatgcctcatcctcgtccccacccgagaattggccatgcagacgtcgcacgtttgcaag
tcattgggaaagcaccttggtatcaacgtcatggtcaccactggaggaaccggacttcga
gatgacattatccgacttcaagaccctgtccacatagtagtgggaacacccggcagaatt
ctcgatttggcaggcaagaatgtcgccgatttgagtgaatgcccgatgtttatcatggat
gaagccgataagctcctctcgcaagagttcacccccgtcatcgagcagctcctgcagttc
caccccaaggaccgccaggtcatgctgttctccgccaccttcccgctgtccgtcaaggac
ttctccgacaagaacatggtcagcccctacgagatcaacctcatggacgagttgacgctg
cggggtatcacccagtactacgccttcgtcgacgaaaagtccaaggtccactgcctgaac
accctcttctccaggcttcagatcaaccagtccatcattttctgcaactcgaccaaccgc
gtcgagcttctcgccaagaagatcaccgagctgggctactcgtgcttctacagtcacgcc
aagatggcccagcaggctcgtaaccgagtcttccacgatttccgaaacggcgtctgccga
aacctcgtctgctccgatctcctcacccgtggtatcgatatccaagccgtaaacgtcgtc
atcaacttcgacttccccaagaacgccgaaacctacctccaccgcattggtcgatccggc
cgatacggccaccttggtctggctattaacctgatcaattgggatgaccgattcaacctg
tacaacattgagcgggacttgggcaccgagatccagcccattccccagaccattgacaag
agtctctacgtctacgaaaaccccgaaacgattccccgccccatctcgactctgaagccg
ggcgtcaacagcacggcgaagcctaatgcgccccaaaacttcaacggccagtcgcaagac
caggcccagcctgcccagcagcgctcccaacacactcaccaccagcagcaacagcctgct
ggacccgcccctaacgtcaactggcagacccagaacctcactcagaacgggcccagtcat
taccagagcaaccgtggtcgcggtcgcggccgaggctaccatggccaaggtcgtggtcgg
ggtagctataacggcggctacggccgaggccgaggccaaggccccgccatccaacaatcc
taa
DBGET
integrated database retrieval system