KEGG   Scedosporium apiospermum: SAPIO_CDS1101
Entry
SAPIO_CDS1101     CDS       T06367                                 
Name
(RefSeq) Replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
sapo  Scedosporium apiospermum
Pathway
sapo03030  DNA replication
sapo03410  Base excision repair
sapo03420  Nucleotide excision repair
sapo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sapo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAPIO_CDS1101
   03410 Base excision repair
    SAPIO_CDS1101
   03420 Nucleotide excision repair
    SAPIO_CDS1101
   03430 Mismatch repair
    SAPIO_CDS1101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sapo03032]
    SAPIO_CDS1101
   03036 Chromosome and associated proteins [BR:sapo03036]
    SAPIO_CDS1101
   03400 DNA repair and recombination proteins [BR:sapo03400]
    SAPIO_CDS1101
DNA replication proteins [BR:sapo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SAPIO_CDS1101
  DNA Replication Termination Factors
   ELG1-RFC complex
    SAPIO_CDS1101
Chromosome and associated proteins [BR:sapo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SAPIO_CDS1101
DNA repair and recombination proteins [BR:sapo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SAPIO_CDS1101
  Check point factors
   HRAD17(Rad24)-RFC complex
    SAPIO_CDS1101
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA AAA_16 Rep_fac_C Rad17 AAA_24 DUF7804 ATPase_2 T4SS-DNA_transf
Other DBs
NCBI-GeneID: 27720173
NCBI-ProteinID: XP_016646014
UniProt: A0A084GFV3
LinkDB
Position
Unknown
AA seq 352 aa
MALIVDKHRPRSLDALTYHSELSDRLRALAQSGDFPHLLVYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASIYHLEITPSDVGTYDRVVIQDLLKEVAQTQQ
VDLSARQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTL
LVRVAAPTHEDICEVLAQSAKKEGWPVVKGLHQRIAEESGRNLRKALLMYESVHAQNEKI
TDSTPIPPPDWEALIGQVAKQIMEERTPRRILEVRSQLYDLLTHCIPATTILTTLTFKLI
PMIDDELKGEVIKWAAFYEHRIKTGTKVIFHLEAFVAKFMRILEMYLMSMDM
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcgctcatcgtcgacaaacaccggccaagatctctggatgccctcacataccattcc
gaactatcagaccgcctcagggcgttggcccaaagcggagacttcccccatctcctagtc
tacggcccttcaggcgcaggcaaaaaaacccgaatagtagcaaccctaaaagaactctac
ggccccggcgtcgagaagatcaaaatcgacgcacgagtcttccaaacgtcatccaaccgc
aagctcgaattcaacatcgtcgcctccatctaccacctcgaaatcaccccttccgacgta
gggacctatgacagggtcgtgatacaggacctcctcaaggaggtcgcgcagacgcaacag
gtggacctgtcggcgaggcagaggttcaaggtggtggtgataaacgaggcagatcacctc
acgcgagacgctcaggcggctttgcgtaggacgatggagaagtactcgccgaacttgagg
ctcatcttgctggcgaactcgactgcgaatattattgcgcctattcggtctcgtacgttg
cttgtgcgggtggcagcgccgactcacgaggatatatgtgaagtgttggctcagtcggcg
aagaaggagggctggcctgtggtaaagggtctgcatcagaggatagcggaggagagtggg
cggaatctacgaaaagcgctcctcatgtacgagtcggtgcatgcccaaaatgagaaaatc
acagatagcacaccgatacctccaccagactgggaagccttaatcggacaagtcgccaag
cagataatggaggagcgcacgcccagaaggatcctcgaggtgcgaagtcagctctacgat
ctcctaacgcactgcatacccgccaccaccattttgacgacgctcacattcaagctcatc
cccatgatcgacgatgaattgaagggagaagttatcaagtgggcggccttttacgagcac
cgcatcaagacggggacgaaggtcattttccacttggaggcgtttgtggctaagttcatg
aggatactcgagatgtacttgatgagtatggatatgtaa

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