KEGG   Scedosporium apiospermum: SAPIO_CDS1155
Entry
SAPIO_CDS1155     CDS       T06367                                 
Name
(RefSeq) Replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
sapo  Scedosporium apiospermum
Pathway
sapo03030  DNA replication
sapo03410  Base excision repair
sapo03420  Nucleotide excision repair
sapo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sapo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAPIO_CDS1155
   03410 Base excision repair
    SAPIO_CDS1155
   03420 Nucleotide excision repair
    SAPIO_CDS1155
   03430 Mismatch repair
    SAPIO_CDS1155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sapo03032]
    SAPIO_CDS1155
   03036 Chromosome and associated proteins [BR:sapo03036]
    SAPIO_CDS1155
   03400 DNA repair and recombination proteins [BR:sapo03400]
    SAPIO_CDS1155
DNA replication proteins [BR:sapo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SAPIO_CDS1155
  DNA Replication Termination Factors
   ELG1-RFC complex
    SAPIO_CDS1155
Chromosome and associated proteins [BR:sapo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SAPIO_CDS1155
DNA repair and recombination proteins [BR:sapo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SAPIO_CDS1155
  Check point factors
   HRAD17(Rad24)-RFC complex
    SAPIO_CDS1155
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_assoc_2 AAA_16 RCF1-5-like_lid AAA_22 AAA_30 AAA_11 AAA_24 RuvB_N AAA_19 DUF815 AAA_5 AAA_3 Sigma54_activat AAA_14 AAA_28 PhoH AAA_18 AAA_25 Mg_chelatase ATPase_2 AAA_7 TniB ResIII SLFN-g3_helicase nSTAND3 bpMoxR DNAX_ATPase_lid CCDC138_C RNA_helicase IstB_IS21
Other DBs
NCBI-GeneID: 27720227
NCBI-ProteinID: XP_016646054
UniProt: A0A084GFZ3
LinkDB
Position
Unknown
AA seq 390 aa
MSDYGDDMDVDGPPAVSVIPESTKGKRSAANLPVEAEDSLPWVEKYRPATLSDVSGHQDI
LATLNKFIETNRLPHLLLYGPPGTGKTSTILALARHIYGHDNMRQMVLELNASDDRGIDV
VREQIKTFASTKQIFSVAPTSKPGGGGAAAGFKLIILDEADAMTNTAQMALRRIMEKYTV
NTRFCIIANYSHKLSPALLSRCTRFRFSPLKEADIKVLVDKVIEEENVKILPEATDALVK
LSRGDMRRALNVLQACHASSTPLRPKNAPKIPESEIVRETITTETIYNCIAAPAPDAIRE
ILDTLLSNPDVTSCLSTINTLKTAQGLALADIITALSEEIAKLEVKPEVMIHWLSGLADI
EHRVAGGGAEGVQTGAVVGVIRNGVELSQR
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgtctgactacggtgacgacatggacgtggacggtccccccgccgtgtccgtcattccg
gagtccacgaaaggcaagcggagcgctgccaatctccccgtcgaagccgaagacagtctc
ccatgggtcgagaaatacagaccagcaaccctatcagacgtctccggccaccaggacatc
ctcgcaaccctaaacaaattcatcgaaaccaaccgcctcccccacctcctcctctacgga
ccccccggcacgggtaaaacctccaccatcctcgccctcgcccgccacatctacggccac
gacaacatgcgccagatggtcctcgagctcaacgcctccgacgaccgaggtatcgacgtc
gtgcgcgaacaaatcaagactttcgcctcgacgaagcaaatcttttccgtcgcgccgact
tcgaaacccggcggcggcggtgcggcggcggggttcaagctcatcatcctcgacgaggcg
gacgccatgacgaacacggcgcagatggcgctgaggaggatcatggagaagtacacggtc
aacacgaggttttgcatcatcgccaactactcgcacaagctgtcgccggcgctactgtcg
aggtgtacgcggttcaggtttagtccgttgaaggaggcggatatcaaggtgttggtggat
aaggtgatcgaggaggagaacgtcaagattcttcccgaggctacggatgcgcttgtgaag
cttagtaggggagatatgagaagggcgctcaacgtgttacaagcctgccacgcttcgagc
acacccctacggcccaaaaacgcccccaaaatccccgaaagcgaaatcgtccgagaaacc
atcacgaccgagacgatatacaactgcatcgccgccccagcgcccgacgccatccgcgaa
atcctcgacaccctcctaagcaacccggatgtcacgtcgtgcctgagcaccatcaacacg
ctcaagacggcgcaagggctcgcgctcgcagacatcatcacggcgctgtcggaggagatt
gcgaagctggaggtcaagcccgaggtcatgattcattggcttagcgggctggcggatatc
gagcatagggttgctggaggaggggcggagggagtgcagacgggggcggttgtgggagtg
attaggaatggcgttgagttgtcgcagaggtag

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