Scedosporium apiospermum: SAPIO_CDS2830
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Entry
SAPIO_CDS2830 CDS
T06367
Name
(RefSeq) putative RNA polymerase II transcription factor B subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03022
Basal transcription factors
sapo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SAPIO_CDS2830
09124 Replication and repair
03420 Nucleotide excision repair
SAPIO_CDS2830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sapo03021
]
SAPIO_CDS2830
03400 DNA repair and recombination proteins [BR:
sapo03400
]
SAPIO_CDS2830
Transcription machinery [BR:
sapo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SAPIO_CDS2830
DNA repair and recombination proteins [BR:
sapo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SAPIO_CDS2830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
27721902
NCBI-ProteinID:
XP_016644535
UniProt:
A0A084GBM4
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MSSPGQPPSGRAAFKKKDGILSLSPDQKTVLWTPAPGTGPPTITLPIENITNLQKTPDSS
PKVMLKIFEKNPDGGDPVTYLFHFNTASAKPEADSMRDALSKVIGALQSTNPNLPKPAQA
AAANGSATPSAAGRASGSMTFAAAVNATPATSKWFDDSQLLNDISLQLEYLKTDSTLNQT
YMEARATKPDSISLGAFNLQFWSSRLHILRAFLIDKNQQKADYNVLATIKPKTVDGDLKL
NITEKQISLIFKQHPLVMRIYNEQVPKLSEPEFWSRFFLSKLSKRLRGERIGPSDAHDPI
FDRYDPNENLLGIYSKITPETIPQIINVEANEANEGGLKSGNRKDVEMRPRKDVPILKTL
NSISAKIMANVAPSDGDPHAPKGVDEKTFNELILRDLRDEEKANRIPLKINEEQAFFSNA
GDISSSNAEIFAKQNPDEVLQLFKANVEKLNTSSPNGIDLHALTGIEDDSDSDMEDDAPP
RPPRVGSRATRAAAQEDILQGIRRHRSEKYGGDWAEDSPMGLPPAIAHQCTITNSTTTEF
LRQFWAAFLSGDPDRALELQYLNEALQRSVGRINAVAEEAEKHRDEIIAQKKREIREYYE
RTKKKIRWKADSVGGGKQAVLALMESTLFALSKAQEEYRKALEAEGLRPTTEG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcctggccagcctccttcgggacgcgctgcgttcaagaagaaggatggaata
ttatcactctcgccggaccagaagactgttctctggacgccagcgccgggcaccggaccg
cctaccatcacccttcccatagagaacatcacaaacctgcaaaagacgcctgatagctcg
cccaaggtgatgctaaagatcttcgagaagaacccagatggcggagatccggtcacgtac
ctcttccacttcaacacggcgtctgcgaagcccgaggctgattctatgagagatgcgctc
tcaaaagttattggcgctctccaaagcaccaatcccaatctaccaaaacccgcacaggca
gcggccgcgaacgggtctgccaccccttcggctgctggtagagcatccggttcgatgacg
tttgccgcggccgtgaatgctacgcctgcaacctcaaagtggttcgatgattcgcagctc
ctcaacgacatctccttgcagctggagtatctgaaaactgatagtaccctcaaccaaacc
tacatggaggccagggcgacgaaacccgactccatctccctgggcgccttcaatttgcag
ttctggtcttcgagacttcacattctacgagcgttcttaatagacaagaaccaacaaaag
gcagactacaatgtcctagccacaatcaagcccaagaccgtcgacggcgatctcaaactc
aacatcaccgagaaacagattagcctcatctttaagcagcaccctcttgtcatgaggata
tacaatgaacaagtcccaaagctatccgaacctgaattctggtctcggtttttccttagc
aagctgtcaaagagattacgcggcgagcgaattgggccgagcgatgcccacgacccgatt
tttgatcgatatgatcccaatgagaaccttttgggcatctactccaaaatcacaccggag
accatccctcaaattatcaacgtcgaagcgaacgaggccaatgaaggtggccttaaaagt
ggaaacagaaaagatgtcgagatgcgtccccgaaaggacgtgcctatcctaaaaaccctg
aatagtataagcgccaagatcatggccaacgtggcaccctctgacggtgaccctcatgca
ccaaagggcgtagacgagaagaccttcaacgaactcatcctccgcgatcttagagacgag
gaaaaggcgaatagaatccctctcaagatcaacgaagagcaagccttcttctccaacgcc
ggagacatctcatcctccaacgccgaaatcttcgcaaagcagaaccccgacgaagtcctc
cagctcttcaaagccaacgtcgagaagctcaacaccagctcccccaacggcatcgacctg
cacgccctaacaggcatcgaagacgacagcgacagcgacatggaggacgacgcgcctcct
cgccctccccgcgtcgggtctcgcgccacccgcgccgctgcccaggaagacatcctccag
ggcatccgccgtcatcggtcggagaagtacggcggtgactgggccgaggactcgcccatg
gggttgccgccggcgatagcgcaccagtgcactattacgaatagcacgacgacggagttc
ttgcggcagttctgggctgcgttcctctcgggtgatccggaccgcgccctcgagttgcag
tacctcaacgaggctctgcagcgtagcgtcggacgcattaatgctgtggcggaggaggca
gagaaacaccgcgatgagattatcgcgcagaagaagagggagattagggagtattatgaa
cggacgaagaagaagattagatggaaggctgattctgttgggggtggaaaacaggctgtc
cttgcgttgatggagtcgactctctttgccttgtccaaggcccaggaggagtataggaag
gcgttggaagccgagggtcttcggcctactacagaaggatag
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