Scedosporium apiospermum: SAPIO_CDS3407
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Entry
SAPIO_CDS3407 CDS
T06367
Name
(RefSeq) Pre-mRNA-splicing factor brr2
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SAPIO_CDS3407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sapo03041
]
SAPIO_CDS3407
Enzymes [BR:
sapo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SAPIO_CDS3407
Spliceosome [BR:
sapo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SAPIO_CDS3407
Complex C
U5 SnRNP specific factors
SAPIO_CDS3407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
BRR2_plug
ResIII
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
27722479
NCBI-ProteinID:
XP_016644213
UniProt:
A0A084GAQ2
LinkDB
All DBs
Position
Unknown
AA seq
2198 aa
AA seq
DB search
MADPRDVSQYKYSAMSNLVLKVDRRLINRPTDKATGEPESIAGRLTIKDMGSRVGREAAP
KPKTLPDVERGSIQEGRDVLLRDQRKRKADGQLRGNGILGAADLAIEGIQYRPRTAATRA
TFDLILTLVANSLGDVPYEVVRSAADAVLEYLKDEDMKDFDKKKEIDEILGITLSPKQFN
DLVNLGKKITDYDAQDEEEEDRASQGSATLDDRQGVAVAFEDEDEEEEEIVPEVRDYSSE
EEEEEEEEEEEAAREADAADAEALRESDEMVIDSTLADQGKQDGETTVPAREIDAFWLQR
QVGKIYSDPKEQHDKTQEALRILSGEPDEPGGEEKPLREIENDLMELFEYEHHELVQLLI
ENREKVVWLTKLARAVSNEERAAVEREMASEGLQWILNELHGKKPEEGKKKLDIKMDIDV
PESITNGAAKAEKPEGQLAGGLQPRKLINLDNLVFDQGNHLMTNPNVKIPAGSTKRTFKG
YEEIHVPAPKKRSDPNDPLIPITEMPEWARVPFSTAKSLNRIQSKCYPTAFQDDGNMLVC
APTGSGKTNVAMLTILRELGKHRDPETGNIDLDSFKIVYIAPLKALVQEQVGNFGKRLQP
YGITVEELTGDRQLTKQQIAETQIIVTTPEKWDVITRKATDLSYTVLVRLIIIDEIHLLH
DDRGPVLESIISRTIRKTEQTGEPVRLVGLSATLPNFRDVASFLRVDMKTGLFHFDGSFR
PCPLRQEFIGVTDRKPIKQLKTMNDVTYNKVLEHVGTNRNQMLIFVHSRKDTAKTARYIR
DKALEMDTINQILRHDAGSRAILNEASEQATDKDLKDLLPYGFGIHHAGMNRADRTDVED
LFAQGSIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRP
QFDTYGEGIIITTQSEMTYYLSLLNQQLPIESQFVSRLVDNLNAEVVLGNVRTRDEGVEW
LGYTYLFVRMLRSPGLYQVGAEYEDDEALEQKRVDLIHSAATVLRKSGLVKYDEKTGKLQ
ATELGRIASHYYITYGSMDTYNTLILPGITTIELFRVFSLSAEFKFIPVRQDEKVELAKL
LSRVPIPVKESIEESHAKINVLLQAYISRLRLEGFALMADMVYVTQSAGRILRAIFEITL
KKGWADVAKTALDLCKMAEKRMWPTMTPLRQFPSCPRDIIQKAERVEAPWSAYFDLDPPR
MGELLGMPRHGRTVCGLVAKFPRLEVQALAKPLTRSMMHITLEIAPNFEWDDEVHGAAES
FWIIVEDCDGERILYHDQFILRREYATAEDNRHIVDFTVEILEPMPPHYFVSLISDRWMA
SETKLALSLLNLILPEKFPPHTELLKLQPLPVSALKVEQYVKLYPDWQNFNPIQTQTFNS
LYSTDDNVLVAAPTGSGKTVCAEFALLRHWAKSSAGKAVYIAPYQDLVDIRLRDWEKRLS
HLRGGKLIVKLTGETATDLDLLNRGDLILATPSQWDVLSRQWRRRKNVQLVELLLADELH
LLGENLGYVYEVVVSRMQYISGQTEHPLRTVALSVSLANARDFGSWIGAKKHDVYNFSPF
VRPLRLELHLQSFSIPHFPSLMLAMAKPTYLAITQMSPNQPALVFVHSRKQTRQTARDLL
AACYADDYEDRFLNAEGDQLKRILDHIDEEPLREALSHGVGYYHEALSQSDRRIVKHLYD
RGAIQVLVASRDVCWELDCTAHLVVVMGTQYFDGQEHRYVDYSMSEVLHMFGKALQPLEK
KSRGVLMVPAVKREFYSKFLREALPVESHVPDNLHDTFVTEISTKMIQSAGDAVNWTTFT
YFYRRLLANPSYYGLSELTDDALGRFISDRVEETFSQLNEAKIIEYDEEDGSVVPLNAAM
IAAYYNISYVTMETFLLSLTGRTKLKGVLEVVTSATEFEAIQLRRHEGGILRRIYEKLPV
KMSGDVNLDSAHFKAFVLLQAHFSRLQLPVDLIKDQEVILSKVLGLLSAAVDILSSEGHL
NAMNAMEMSQMVVQSMWDRDSPLKQIPHFTDDTVKAAHKFGIKDIFDFMEAMNPEENPDY
SSLVKALGLTNNQLAQVADFTNNKYPDIEMEHEIEDEDEIRSNEPAYLNIRIQRNIEEDD
EVDPTVHAPFYPAKKMENWWLVVGEESTKSLLAIKRVTILRKLDVKLEFTVPTEGKHDLK
LYLMSDSYMGVDQEREFTVTAAEGMDVDEEDEEDEDEE
NT seq
6597 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccacgagatgtgtcgcagtacaagtactcggccatgtccaaccttgtcctc
aaggtggaccggcgacttatcaaccggcccacggacaaggcgacaggcgagccagagtct
attgccggtcgcttgacgatcaaagatatggggtcgcgcgtcggccgcgaagccgcgccg
aaaccgaagacccttccagatgttgagagaggaagcatacaagaaggccgagatgtgttg
ttaagagaccaaaggaagcgcaaggccgatggccagttacgggggaatggtattctgggc
gcagcagatctcgccatcgaaggcatccaataccgtccacggacagccgccacgcgcgcg
accttcgaccttatcctaacactcgtcgccaacagcttaggcgacgtaccctacgaagtg
gtgcgaagcgctgccgacgccgtcttggagtatctcaaagatgaggacatgaaggacttt
gataagaagaaggagatcgacgagattctgggcataacactgagcccgaagcagttcaac
gaccttgtcaatctaggcaagaaaatcaccgactacgatgcgcaagacgaagaagaagag
gatagggcatcacagggcagtgccacccttgacgatcggcaaggtgtcgctgttgcgttc
gaggacgaagacgaagaggaggaggagattgttcctgaggtccgtgactattcatctgaa
gaagaggaggaagaagaagaggaagaagaggaagctgcgagagaagccgatgccgctgac
gcagaggcattacgagaaagcgacgaaatggttatcgactctactctagcagaccaaggg
aagcaagatggggagaccactgtaccagcccgggaaatagatgccttttggcttcagcgg
caagtcggcaagatctattctgaccccaaagaacaacacgataaaacccaagaggcgctg
cgaatactctctggcgaaccggacgagccgggtggcgaagagaagccgttgcgagaaatc
gagaacgacctcatggagcttttcgaatacgaacaccacgagctcgtccagctccttatc
gagaaccgagagaaggtcgtctggcttaccaagttagcgcgggctgtgagcaacgaggag
cgtgctgctgtcgaacgcgaaatggcttcagaaggcttgcagtggattctcaatgaacta
cacgggaagaagcccgaggaaggcaagaagaagcttgatatcaagatggacatcgacgtc
ccggaatctatcaccaacggtgccgccaaggccgagaaacccgaaggccagcttgcaggt
gggttacaaccgcggaagctcatcaacctagacaatctcgttttcgaccagggcaaccat
ctcatgacgaacccaaatgtaaagatacctgcgggttctacgaagcgcactttcaagggc
tatgaagagatccatgtcccagcaccgaagaagcggagtgaccccaacgatccccttatc
ccgattacagagatgccagagtgggctcgtgttccctttagtaccgcgaagtctctgaac
aggatccagtcgaagtgctatcccacggcgttccaagatgatggaaatatgcttgtttgc
gctcccactggcagtggtaagacaaacgtagctatgcttacaattcttagggagctcggc
aagcaccgcgatccggagactggcaatattgacctggatagcttcaaaattgtatacatc
gcccctctgaaggcccttgtccaggaacaggtcgggaactttggcaagaggctccagccc
tacggtattacagttgaggaacttactggcgaccgccagctcacgaagcaacagatcgcg
gagactcagatcatcgtgaccaccccagagaagtgggatgtcattactcggaaagcgacg
gatctctcctatactgttctcgtccgactgatcattattgacgagatccacctgctacat
gatgaccgtggtccagttttggaaagcatcataagtcgtaccatccgcaagactgagcag
accggtgaaccggtccgcctagttggcctatcagctactctgcccaacttcagggacgta
gcgagcttcctccgagttgatatgaagacaggactcttccactttgatggatctttccga
ccctgcccactccgccaagagttcatcggcgtcacagaccgcaagcccatcaaacaactc
aagacaatgaacgatgttacctacaacaaggtcctggagcatgtcggtaccaataggaac
cagatgctgatctttgttcactcgagaaaagacacagccaagactgcccggtacattcga
gacaaggctttggaaatggataccattaaccaaattctacgtcacgacgctggtagccgc
gctatcctgaacgaagcctcggagcaagctactgataaggacctcaaagatcttctaccc
tacggattcggaatccatcatgccggcatgaaccgagccgaccgtaccgatgtcgaggat
ctcttcgcccaaggttctattcaggtccttgtttgtactgctacgttggcttggggtgta
aaccttcctgcgcatacagtcatcatcaagggtacacaggtttactctcccgagaagggt
agctgggttgagcttagtcctcaggacgttctacaaatgcttggtcgtgcgggccggcct
cagttcgatacctacggagagggcattatcataacgacgcaaagcgagatgacgtattat
ctatcgctcttgaatcaacaattacccattgagagtcagtttgtgagccgcctggtcgac
aatctgaatgcagaagttgtgcttggtaatgtccgaacgcgagacgagggagtagagtgg
cttgggtacacgtatctcttcgtccgtatgcttcggtcaccaggcctttaccaagtcggg
gcggaatatgaagacgacgaagccctcgaacaaaaacgagttgatctcatccactcggcg
gccaccgtcctccgaaagtcgggcctggtcaagtatgatgaaaagacggggaagctacag
gctactgaactgggtcgtattgcttctcattactacatcacctacggctcgatggatacc
tacaacaccctgattcttccgggcattaccaccattgagctcttccgagtattctcgctc
agcgccgaattcaagttcattcccgtccgacaagacgaaaaggttgaacttgcgaagctt
cttagccgagttccgatccccgtcaaggagagtatcgaagaatcccacgccaagatcaat
gttcttctacaggcctacatttctcggcttcgcttggagggtttcgctctcatggccgac
atggtctacgttactcaatctgcagggcgaatcttgcgtgccatcttcgaaatcaccttg
aagaagggctgggctgatgttgcaaagacagccctcgacctatgcaagatggcagagaag
aggatgtggccgacgatgacaccacttcgccagttccccagctgccctcgcgacatcatc
caaaaggcagaacgagttgaggccccttggagtgcatacttcgaccttgaccctccaagg
atgggagaactcctcggtatgccgcgacacggccggactgtctgtggactagtcgccaag
ttccccagactggaggtgcaggccctcgcgaagcccctcacgaggtcaatgatgcatata
actcttgaaatagcgccaaactttgagtgggacgatgaagtccacggcgcagcagagagc
ttttggatcattgtcgaagactgcgatggagagcggatcctctaccatgatcaattcatc
ctccgaagggagtacgcgacggctgaagataaccgccacatcgtagactttaccgtggaa
attttggaacccatgccaccccattacttcgtctccttgatttcagatcgatggatggcc
tcggaaactaagctggctctctctcttctgaacctcatcctaccagaaaagttcccgccg
catactgagctccttaagcttcagcctctccccgtgtccgcgctcaaggttgaacaatac
gtcaagctataccctgactggcaaaatttcaatcctatccagactcaaacgttcaattcg
ctgtatagcactgacgacaatgtacttgtcgctgcgcccaccggatccgggaagactgtc
tgcgcagaattcgcccttctccgtcactgggcgaagagctcggccggtaaagccgtatat
atcgccccctaccaagaccttgttgacatacggttgcgcgactgggagaagcggcttagc
catttgcgtggcggcaagttgattgtgaagctcacgggtgagacggcaaccgatcttgac
ctgctcaataggggtgacctgatcttggccacaccgtctcagtgggacgttctgtcgcgc
cagtggaggcggcgcaagaacgtccagctggtcgagcttctccttgccgacgagctgcat
ctcctaggagagaatctggggtacgtctacgaagtcgtcgtgtcccggatgcagtacatc
agtggccagacggagcaccctctgcgaacggtggctctcagcgtctccctcgcgaacgcg
agagattttgggtcttggatcggcgcgaagaagcacgacgtgtacaacttcagcccgttt
gtccggcccctgcgactcgagcttcatcttcaatccttctcaatcccccatttcccttct
ctcatgttagcaatggcgaagcccacctaccttgccataacacaaatgtcgccgaatcaa
ccggccttggtttttgtccacagccgaaagcagactcggcaaacggctcgagatcttctt
gcagcctgttatgcggatgactacgaagaccgtttccttaatgctgaaggcgaccagctc
aagcgcattctcgatcacattgacgaggaacctctccgtgaagccctatctcatggtgtc
ggctactaccacgaggctctcagccagagcgaccggcgcatcgtcaagcatctctatgat
agaggagctattcaggtcttggtcgcgtctcgtgacgtttgctgggagctggactgcact
gcccacctagtggtggttatgggcactcagtatttcgacgggcaagaacaccgctatgtg
gactattctatgagcgaggtcctacatatgttcggcaaggccttgcagcctttggaaaag
aagagccgcggcgtgctcatggtaccagcagtgaagcgagagttctacagcaagttcttg
agggaggcgcttccggtagagtcgcacgttcccgataacctccacgatacgtttgtcact
gagatcagcaccaagatgatccagtcggccggcgatgctgtcaactggaccaccttcacc
tacttctacaggcgcctgcttgccaacccaagctactacggcctcagcgaactaacggat
gacgctctcggtcgcttcatttccgaccgggtagaagagacgttcagccagttgaacgag
gcgaagattatcgagtacgatgaggaggacggctccgtcgtgcccttgaacgcagccatg
atcgcagcatactacaacatctcctacgtgaccatggaaaccttccttctctcgctcact
ggtcgcacgaagctcaagggagtcctcgaagttgtgacgtccgccacggagtttgaggca
atccagctaaggagacacgaaggcggaattctacgccgtatatacgagaaacttcccgtc
aagatgtcgggagacgtcaacctggactcagcgcatttcaaggctttcgtcctgcttcaa
gcacacttttcaaggctccagctgcctgtcgatctcatcaaggaccaggaggttatccta
tccaaggtgctcggccttctcagtgcagccgtcgacatcctttcttccgaaggacacctc
aatgccatgaacgccatggaaatgtcacagatggtggtacagtccatgtgggatcgcgat
agcccgctcaagcagatccctcactttacggacgatactgtcaaagccgctcataagttc
ggaattaaggacattttcgatttcatggaggcaatgaaccctgaagagaatcctgattac
agctcgctggtcaaggctctaggtctcaccaacaatcagctagcgcaggttgccgacttc
accaacaacaagtaccccgatatcgaaatggagcacgagatcgaggacgaggacgagatc
cgctcgaacgagccggcgtacttgaacattcggattcagcgcaacattgaagaggacgat
gaagtggacccgacggtccatgcgccattttaccccgcgaagaagatggaaaattggtgg
ctggttgtcggcgaagagagcaccaagagccttttggcgatcaagagggtgacaattctg
aggaaacttgacgtaaagttggagtttacggtacctacggagggcaagcatgatctgaag
ctctatctcatgagtgacagttatatgggcgtggatcaagaacgggagtttactgtcacg
gcagcagagggtatggacgtcgacgaggaggacgaggaagacgaggatgaagagtaa
DBGET
integrated database retrieval system
