KEGG   Scedosporium apiospermum: SAPIO_CDS3409
Entry
SAPIO_CDS3409     CDS       T06367                                 
Name
(RefSeq) Replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
sapo  Scedosporium apiospermum
Pathway
sapo03030  DNA replication
sapo03410  Base excision repair
sapo03420  Nucleotide excision repair
sapo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sapo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAPIO_CDS3409
   03410 Base excision repair
    SAPIO_CDS3409
   03420 Nucleotide excision repair
    SAPIO_CDS3409
   03430 Mismatch repair
    SAPIO_CDS3409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sapo03032]
    SAPIO_CDS3409
   03036 Chromosome and associated proteins [BR:sapo03036]
    SAPIO_CDS3409
   03400 DNA repair and recombination proteins [BR:sapo03400]
    SAPIO_CDS3409
DNA replication proteins [BR:sapo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SAPIO_CDS3409
  DNA Replication Termination Factors
   ELG1-RFC complex
    SAPIO_CDS3409
Chromosome and associated proteins [BR:sapo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SAPIO_CDS3409
DNA repair and recombination proteins [BR:sapo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SAPIO_CDS3409
  Check point factors
   HRAD17(Rad24)-RFC complex
    SAPIO_CDS3409
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 RCF1-5-like_lid RuvB_N AAA_22 AAA_11 AAA_16 Mg_chelatase AAA_28 AAA_assoc_2 AAA_14 DNAX_ATPase_lid AAA_24 AAA_7 AAA_19 AAA_5 SLFN-g3_helicase DUF815 ResIII bpMoxR AAA_30 nSTAND3 AAA_3 AAA_2 RNA_helicase
Other DBs
NCBI-GeneID: 27722481
NCBI-ProteinID: XP_016644214
UniProt: A0A084GAQ3
LinkDB
Position
Unknown
AA seq 381 aa
MASFFDIKARKQAAANGAGTQKQDKSAQPPRTQPWVEKYRPRTLNDVAAQEHTTAVLQRT
LQASNLPHMLFYGPPGTGKTSTILALAKELYGPEFMKSRVLELNASDERGISIVREKVKD
FARMQLTNPPPGYKDKYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLICNY
VTRIIDPLASRCSKFRFKSLDKSNTRARLAEIAEKESVPLDDGALDALIKCSEGDLRKAI
TFLQSSARLVGSMGGVDQDGDEEMDGQKKVVTAKIVEDIAGVIPAPTIDTLVKAMRPRGS
GSTFTPVAEVVQEMVADGWSAGQVLNQLYQAIIFDETIPDKQKNKIVMVFSEIDKRLVDG
ASEHLSILDMALRISAIMAGK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggcgagcttcttcgacatcaaggccaggaaacaggctgccgccaacggcgcagggact
cagaagcaagacaaatcggcacaacccccaagaacgcagccatgggtagagaaataccgt
ccacggaccctcaacgatgttgctgcccaggagcataccaccgctgtccttcagaggacc
ctgcaggcttctaacctacctcacatgctcttttacggccctccaggaacaggcaaaacc
tctacgattctcgccttagcgaaggaactctacggacccgagttcatgaaatctcgcgtc
ctcgaactcaacgcctcagacgaacgcggtatctctatcgtccgggaaaaggtcaaagac
tttgcgcgaatgcagctcacgaacccccctcccggctacaaagacaaatacccctgccca
cccttcaagatcatcatcctcgatgaggccgactccatgacgcaggacgcccagagcgct
cttcgccgcacaatggaaacgtacagcaagattacccggttctgcctcatttgcaattac
gtcacccgtataatcgacccgttggcgagtcgatgcagcaagttccgcttcaagagctta
gacaagtcgaacacgagggcgaggctcgccgagattgccgagaaggagtccgttccgctc
gatgatggcgccttggatgctctaataaagtgtagcgagggcgatttgcgaaaggccatc
accttcctccaaagttccgcccggttagttggctcgatgggaggcgtggaccaggacgga
gacgaagagatggatggacagaaaaaggttgtcacggccaagattgtcgaggacattgct
ggcgtaataccggctccgacaattgatactcttgtgaaggctatgcgcccaagaggatcc
ggttcgacatttaccccggtcgccgaggttgtgcaggaaatggtggcggatggctggagt
gccggacaggtcctgaaccagctttatcaagccatcatattcgatgagaccatccccgac
aagcaaaagaacaagattgttatggtgttttccgaaatcgacaagaggttggttgacggc
gcgagcgaacacttgtcgattctagacatggccctgagaatatctgccatcatggctggt
aaatag

DBGET integrated database retrieval system