Scedosporium apiospermum: SAPIO_CDS3409
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Entry
SAPIO_CDS3409 CDS
T06367
Name
(RefSeq) Replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03030
DNA replication
sapo03410
Base excision repair
sapo03420
Nucleotide excision repair
sapo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAPIO_CDS3409
03410 Base excision repair
SAPIO_CDS3409
03420 Nucleotide excision repair
SAPIO_CDS3409
03430 Mismatch repair
SAPIO_CDS3409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sapo03032
]
SAPIO_CDS3409
03036 Chromosome and associated proteins [BR:
sapo03036
]
SAPIO_CDS3409
03400 DNA repair and recombination proteins [BR:
sapo03400
]
SAPIO_CDS3409
DNA replication proteins [BR:
sapo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SAPIO_CDS3409
DNA Replication Termination Factors
ELG1-RFC complex
SAPIO_CDS3409
Chromosome and associated proteins [BR:
sapo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SAPIO_CDS3409
DNA repair and recombination proteins [BR:
sapo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SAPIO_CDS3409
Check point factors
HRAD17(Rad24)-RFC complex
SAPIO_CDS3409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
RuvB_N
AAA_22
AAA_11
AAA_16
Mg_chelatase
AAA_28
AAA_assoc_2
AAA_14
DNAX_ATPase_lid
AAA_24
AAA_7
AAA_19
AAA_5
SLFN-g3_helicase
DUF815
ResIII
bpMoxR
AAA_30
nSTAND3
AAA_3
AAA_2
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
27722481
NCBI-ProteinID:
XP_016644214
UniProt:
A0A084GAQ3
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MASFFDIKARKQAAANGAGTQKQDKSAQPPRTQPWVEKYRPRTLNDVAAQEHTTAVLQRT
LQASNLPHMLFYGPPGTGKTSTILALAKELYGPEFMKSRVLELNASDERGISIVREKVKD
FARMQLTNPPPGYKDKYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLICNY
VTRIIDPLASRCSKFRFKSLDKSNTRARLAEIAEKESVPLDDGALDALIKCSEGDLRKAI
TFLQSSARLVGSMGGVDQDGDEEMDGQKKVVTAKIVEDIAGVIPAPTIDTLVKAMRPRGS
GSTFTPVAEVVQEMVADGWSAGQVLNQLYQAIIFDETIPDKQKNKIVMVFSEIDKRLVDG
ASEHLSILDMALRISAIMAGK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttcttcgacatcaaggccaggaaacaggctgccgccaacggcgcagggact
cagaagcaagacaaatcggcacaacccccaagaacgcagccatgggtagagaaataccgt
ccacggaccctcaacgatgttgctgcccaggagcataccaccgctgtccttcagaggacc
ctgcaggcttctaacctacctcacatgctcttttacggccctccaggaacaggcaaaacc
tctacgattctcgccttagcgaaggaactctacggacccgagttcatgaaatctcgcgtc
ctcgaactcaacgcctcagacgaacgcggtatctctatcgtccgggaaaaggtcaaagac
tttgcgcgaatgcagctcacgaacccccctcccggctacaaagacaaatacccctgccca
cccttcaagatcatcatcctcgatgaggccgactccatgacgcaggacgcccagagcgct
cttcgccgcacaatggaaacgtacagcaagattacccggttctgcctcatttgcaattac
gtcacccgtataatcgacccgttggcgagtcgatgcagcaagttccgcttcaagagctta
gacaagtcgaacacgagggcgaggctcgccgagattgccgagaaggagtccgttccgctc
gatgatggcgccttggatgctctaataaagtgtagcgagggcgatttgcgaaaggccatc
accttcctccaaagttccgcccggttagttggctcgatgggaggcgtggaccaggacgga
gacgaagagatggatggacagaaaaaggttgtcacggccaagattgtcgaggacattgct
ggcgtaataccggctccgacaattgatactcttgtgaaggctatgcgcccaagaggatcc
ggttcgacatttaccccggtcgccgaggttgtgcaggaaatggtggcggatggctggagt
gccggacaggtcctgaaccagctttatcaagccatcatattcgatgagaccatccccgac
aagcaaaagaacaagattgttatggtgttttccgaaatcgacaagaggttggttgacggc
gcgagcgaacacttgtcgattctagacatggccctgagaatatctgccatcatggctggt
aaatag
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