KEGG   Scedosporium apiospermum: SAPIO_CDS4007
Entry
SAPIO_CDS4007     CDS       T06367                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
sapo  Scedosporium apiospermum
Pathway
sapo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sapo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAPIO_CDS4007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sapo03019]
    SAPIO_CDS4007
Messenger RNA biogenesis [BR:sapo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SAPIO_CDS4007
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SAPIO_CDS4007
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 27723079
NCBI-ProteinID: XP_016643643
UniProt: A0A084G932
LinkDB
Position
Unknown
AA seq 187 aa
MENLTISDSGPRGGGGAAPPPAGSAPGGLQGPPVPQQLPPQMFTTAAQLLDLTDKKLMVA
LRDGRKLIGILRSWDQFANLVLQSTIERVFVPPPQKEDGTIDTTQRGLYADIPRGIFLVR
GENVLLLGEIDLDKDDEPPAGYDAAEAAVVQKLARERKEAEKAKSKARIGRLNAIGFEGE
HMGDVLL
NT seq 564 nt   +upstreamnt  +downstreamnt
atggagaacctaacgatatccgattccggaccccgcggcggaggaggagctgcgcctcct
ccggctggaagcgcgccgggtggtctccagggcccgccggttcctcagcagttaccgcct
cagatgtttacgactgcggcgcagcttttggatctcacagataagaagttgatggttgcg
ctacgtgatggaaggaaactcattggcatactgagaagctgggatcaattcgccaacctc
gtcctccaatcaaccatcgaacgcgtcttcgtcccacccccccaaaaagaagacggcacc
atcgacacgacacagcgcggcctctacgccgacatcccgcggggcatcttcctcgtgcgc
ggcgaaaatgtgctccttttaggagaaatcgacctcgacaaggacgacgagccgccggcg
gggtacgacgcggcggaggcggcggtggtgcagaagttagcaagggagaggaaggaggcg
gagaaggcgaagagtaaggctaggattgggaggttgaatgctattgggtttgagggggag
catatgggggacgtgctgttgtga

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