Scedosporium apiospermum: SAPIO_CDS4007
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Entry
SAPIO_CDS4007 CDS
T06367
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIO_CDS4007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS4007
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SAPIO_CDS4007
mRNA degradation factors
5'-3' decay
Lsm complex
SAPIO_CDS4007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
27723079
NCBI-ProteinID:
XP_016643643
UniProt:
A0A084G932
LinkDB
All DBs
Position
Unknown
AA seq
187 aa
AA seq
DB search
MENLTISDSGPRGGGGAAPPPAGSAPGGLQGPPVPQQLPPQMFTTAAQLLDLTDKKLMVA
LRDGRKLIGILRSWDQFANLVLQSTIERVFVPPPQKEDGTIDTTQRGLYADIPRGIFLVR
GENVLLLGEIDLDKDDEPPAGYDAAEAAVVQKLARERKEAEKAKSKARIGRLNAIGFEGE
HMGDVLL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctaacgatatccgattccggaccccgcggcggaggaggagctgcgcctcct
ccggctggaagcgcgccgggtggtctccagggcccgccggttcctcagcagttaccgcct
cagatgtttacgactgcggcgcagcttttggatctcacagataagaagttgatggttgcg
ctacgtgatggaaggaaactcattggcatactgagaagctgggatcaattcgccaacctc
gtcctccaatcaaccatcgaacgcgtcttcgtcccacccccccaaaaagaagacggcacc
atcgacacgacacagcgcggcctctacgccgacatcccgcggggcatcttcctcgtgcgc
ggcgaaaatgtgctccttttaggagaaatcgacctcgacaaggacgacgagccgccggcg
gggtacgacgcggcggaggcggcggtggtgcagaagttagcaagggagaggaaggaggcg
gagaaggcgaagagtaaggctaggattgggaggttgaatgctattgggtttgagggggag
catatgggggacgtgctgttgtga
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integrated database retrieval system