Scedosporium apiospermum: SAPIO_CDS4399
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Entry
SAPIO_CDS4399 CDS
T06367
Name
(RefSeq) Antiviral protein
KO
K12600
superkiller protein 3
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIO_CDS4399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS4399
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
SAPIO_CDS4399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_22
TPR_1
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_12
TPR_8
TPR_7
TPR_Slam
ARM_TT21_C
TPR_9
T7SS_EccA1_N
ANAPC3
TPR_4
DUF4192
Motif
Other DBs
NCBI-GeneID:
27723471
NCBI-ProteinID:
XP_016643302
UniProt:
A0A084G841
LinkDB
All DBs
Position
Unknown
AA seq
1426 aa
AA seq
DB search
MSSVKAQLKAIGDAVKTNQFDDAIELSRALIQKDSKNYLGHIFLGFSLEKRQQLDAAERA
YLDAAKIQPQSPQAWQGLIKLFEVQDRKKLSAYRDAAIKLAEIYSQVNELPKCRDAINKF
VEFANENGDRRQYVDALALTTPESPVYEALEGHVPRPAHTYEKMATIAEEDERKRINTLI
GERRTRIGARLNDVTVEVKREVLTESKLEHIYRQLINWVADDELRRLYEEKLLRHCYDRL
VVTPPGDEKTAIRDTVVQLANDMVIIKHPLKFAWDIAIDWKDYKDIAEWDVNILREYCSF
FPDSDVYKVITGFLTSSISPFPAAPKPQVAADLVESEEETSEDDSDGGAPTSFVPVTDED
RLLMMTDGIATANSLLAYRLMGEYYQHLEEYESTVELMRKALVHVNQERVKSGFSFRNTI
DAYSLYLGTSLVFYQSPRHHEEAMSLFNKVLDHDPTSTPAMIGVGLIYEEEEEYPKAVDF
LTRALERDASNLRVRTEAAWVRALAGDYAAGKEELAQCVALLEKKKSSKANKELLALTQY
RLGCCIWNLDKSKAARKDRNGAYAYFLGALKNNLNLAPAYTSLGKFYADYAKDKKRAKRC
FQKAVELSSSEVEAAERLARSFADEGDWDRVEVVARRVVDSGKVKPPPGSKRKGISWPHS
ALGVALMNKSEYRDAIVSFQAALRISPEDYHSWVGLGESYYSSGRYIAATKAVLHAQTLE
ETASPEVLGDAWFTKYMLANIKRELGEFDEAVTLYTEVHSSRPSEEGVILALMQTMIENA
RDCIVKGFFGKAVQLSTDVIELSVETNALVSQTFNYWKVLGDACSVYVSVRSRIEEFPVN
TIQQLLQGADIESHADVLADVDKVQPNAAEAESIFPSGELNGEILSKCLHGMILCFKLAI
HVSSNDIHAQAVAYYNLGWAEYQAHTCLPLKGKKKKSSQYLRAAIRAFKRAIELEHGNAE
FWNSLGVVTSQINPEVSQHAFVRSLHIDERNPIAWTNLATLALLQNDAQLANEAFTRAQS
NDPEYSYAWLGQGFVALLFGDKDEARGLFTHAMEISNSSTVAIRHQYSASIFDHIVTSPA
KMGIIDLLQPLYALSQSEAMSPGDLAYRHLRTLFQERIHDHSKALGTLEDICGILEAEYE
ESESPEALGRFALAKVDLARSYLATGRYDDAVECGDMALSLTSDEAENELDKEQRKKGRL
SAHLTVGLAQYFKGDIVESISYFESGLEECDGDADAVCLLAQVLWATGSEESREKARDVL
FTVIEEQPDHIQSVLLLGVIALLDDDDESLEAVVSELHSLRTSDKVKGADHSRIGTVLKC
IRMMPEDRTEEDVLTEIQTDIMLYPHLPHGWTSLATVSGAEYPAEMAVKVALAGIPPRGS
LDAGDLAKAYAGTGKAADAQAAIFVAPWASDGWKSLGEIVEAAMNG
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtcaaggcccaattgaaggccattggtgatgcggtgaagacgaatcagttt
gacgatgccatcgagctatctcgggccctcattcaaaaggattcaaaaaattacctaggt
catattttcttgggtttctcactagagaagagacagcagctggatgctgcggaaagggcc
tacttagatgccgcgaagattcaaccacagtccccccaggcatggcagggcctgataaag
ctctttgaagtacaggacaggaagaaattgtcagcctatcgagacgccgccatcaagctg
gcggagatctacagccaggtcaatgagctgccgaaatgccgagacgctatcaacaagttc
gtcgagttcgcgaatgagaatggtgatcggaggcaatatgtcgatgccttggcccttacg
acacccgagagtccagtatacgaggctctcgagggccacgttccccgccccgcccacacg
tatgagaaaatggctactatcgccgaggaggatgaaaggaagcgaatcaacacgttgatc
ggagagcggaggacgaggattggtgcgagactgaacgacgtgacagtggaagtcaagagg
gaggtcctaaccgagagcaaactcgaacacatctatcgacaactcatcaactgggtcgcc
gacgatgagcttcgtcgcctttacgaggagaaactcctccgacactgttacgatcgcctc
gtcgtgactccacccggagatgagaagacggcgattcgtgacactgtcgttcaactcgcc
aacgacatggtcatcattaaacaccctctaaagttcgcgtgggatatcgccattgactgg
aaggattataaggacatcgcagagtgggacgtcaacattctcagagaatattgctcgttc
ttccccgacagcgatgtgtacaaggtcatcaccggtttcttgacgagctccatttctccg
ttccccgccgcccctaagccgcaagttgctgctgacctcgtcgagtccgaggaagagacc
agtgaggacgattctgacggcggggctcctacgtcgtttgttccagtcactgacgaagac
cgacttctcatgatgaccgacgggatcgcaactgcaaactcactgcttgcgtatcgtctt
atgggagagtactatcagcacctcgaggaatacgaaagcacggtagagttgatgcgcaag
gccctagttcacgtcaaccaggagcgagtaaaatccggattctctttccggaataccatc
gatgcgtattcgctgtaccttggaacatccctagtcttttaccagtctcccaggcatcat
gaagaggcaatgtccctgttcaacaaggtgctagaccacgaccctacctcaactccggcg
atgattggtgtgggtttaatctacgaagaagaggaggaataccctaaagcagtcgacttt
ctaacgcgagcactcgagcgtgatgcttcaaaccttcgagttcggaccgaggccgcttgg
gtcagggcactcgcgggggattatgctgctggaaaagaagagctggcgcaatgcgttgcc
cttttggagaagaagaagagctcaaaagccaataaggagcttctagccctcactcagtat
agactgggatgctgcatctggaacctcgacaaatcaaaggccgcccgaaaagaccgcaac
ggggcctacgcttacttcctgggtgctctaaagaataaccttaacctggccccggcctac
acaagcctgggcaaattctatgccgactacgcgaaggacaaaaagagagccaagcgatgc
ttccaaaaggctgtcgaactgtcttcatctgaagtggaggccgctgaaagacttgcgcga
tccttcgccgatgagggggattgggatcgggtcgaagtggtggctcggcgtgtcgtggat
tctggcaaagtcaagccacctcccggatccaagaggaagggcatatcgtggccccattcg
gccctcggagttgcactcatgaataagtcggaataccgagatgcaatcgtgtctttccag
gctgctcttcggatatcacccgaagactaccattcatgggttggactgggcgagagctat
tacagttcaggtcgctatattgcggccacgaaagcggttctgcatgcccaaactctcgag
gagacggcgtctcccgaggttctgggggatgcatggttcaccaagtatatgcttgctaac
atcaagcgggaacttggcgaattcgacgaagccgtgaccttgtacacggaggtgcatagc
agccgccccagcgaggagggagttatcctggccttgatgcagactatgattgagaatgcc
agggactgcattgttaagggattcttcggcaaggccgtccagctgtcgacggacgtgatt
gagctttccgttgagacaaatgccctggtttcccagacctttaactactggaaagtactc
ggagatgcctgctcagtctatgtttcagttcggagtcggattgaagagttccctgtaaac
actattcaacaacttttgcagggtgctgacatagagtcccacgccgacgtgcttgcggat
gttgacaaggttcaaccgaacgccgcagaggccgagagcatcttcccaagtggcgagctg
aacggggagatactatctaagtgtctccacggcatgattctctgcttcaagctcgctatt
catgtttcctccaacgatatccatgcgcaagctgtggcctattataatcttggttgggcg
gaataccaggcccatacctgcctcccccttaagggaaagaagaagaagtcgagccagtac
ctgcgtgccgccatcagagcgttcaagagggcaatcgagctggagcacggcaatgccgag
ttttggaattctcttggtgtggtgaccagccagatcaaccccgaagtgtcccagcatgcc
tttgtcaggagtcttcatatcgatgagcgtaaccctatcgcatggaccaatctcgcaacg
ttggctctcctccagaatgacgcgcaacttgcaaacgaagcgtttacgagagcccagtcg
aatgaccctgaatactcctatgcctggcttggacagggcttcgtcgctctgctttttgga
gacaaggacgaagcgcgaggcctctttacgcatgccatggaaatttccaattcttctaca
gttgctatccgccaccagtactcggcgtcgatattcgaccatattgtcacatcccctgct
aagatgggaattatcgacctacttcagccactctatgcgctctcccaatccgaggcaatg
tcccccggagacttggcctaccgccatttacgaactctcttccaagaacgaatccacgac
cattccaaggctcttggaaccctagaggatatttgtggcatcctagaagccgagtacgaa
gaatccgaatcgcccgaggctctcggtcgcttcgcgctggccaaggtcgatcttgcgaga
tcctacctcgcaacaggacggtacgatgacgctgtagaatgcggtgacatggcgttgagc
ctgaccagcgacgaggcggagaacgaattagacaaggagcagcgcaaaaagggcagattg
tcggcccatcttaccgtcggtctcgctcagtatttcaagggggacattgtcgagtcgatc
tcgtattttgaatctggtctcgaggaatgcgacggagatgcggacgcagtctgcctactt
gcgcaggtgctctgggccacgggctccgaagagtctcgagagaaggccagagatgtgctg
ttcaccgtcatcgaagagcagccggatcacatccaatcggtccttttgctgggtgtcatt
gcgctattggacgacgacgacgagagcctcgaggcagttgtatccgagcttcattcgcta
cgcacgagcgacaaggtcaagggtgcggaccattcccggatcggtacggtgctcaagtgt
atccgaatgatgccggaggacagaaccgaggaggatgtcctcacagagatacagacggac
attatgctgtatccccatctcccgcacggttggacctccctcgctacggtttctggcgcc
gagtacccagctgagatggcggtcaaggttgcgctggcgggtattccgcctagaggtagt
ctcgatgcgggcgatttggccaaggcgtatgctggtactggcaaggcggctgatgcgcag
gctgctatcttcgtggcgccttgggctagtgatggatggaaatctttgggcgagattgtg
gaggcggccatgaatggatga
DBGET
integrated database retrieval system
