Scedosporium apiospermum: SAPIO_CDS4887
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Entry
SAPIO_CDS4887 CDS
T06367
Name
(RefSeq) hypothetical protein
KO
K11701
helicase required for RNAi-mediated heterochromatin assembly 1 [EC:
5.6.2.5
]
Organism
sapo
Scedosporium apiospermum
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sapo03036
]
SAPIO_CDS4887
Enzymes [BR:
sapo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
SAPIO_CDS4887
Chromosome and associated proteins [BR:
sapo03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
SAPIO_CDS4887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
Viral_helicase1
ResIII
PhoH
DEAD
Motif
Other DBs
NCBI-GeneID:
27723959
NCBI-ProteinID:
XP_016643010
UniProt:
A0A084G799
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MEPFSVPWDQVPECPTSAELLSSEPRKLPINDVNHTPGDKARYLETQYRLIRYEGVELLR
RAIHEYREDPKMQESSETAIYTDVTVHGYQVTRLGTLCRIGFFPDRTDKRIRWSHSPRLT
PGTVVALSTPRDNFNTICRIATVIQRFVTGGLEPDTKAGEPVTTPPRIDIAWADPVDAVL
DPAKHMVMIEAKAGYYESVRHTMRGLQLWSNKDSRFDRYLIMGAKDASPPEYIERLKNLI
DFSPVLSQPLQPQNKKKKNPNSNKSQVKTLNGKGISTSINMSRPFPPEMSALTGMDESQL
GAIRNILTSEFPIVQGPPGTGKTFVSVSAIRILLRNLDWKTPIVIAAQTNHALDQLLVLV
HQATKAPFIRLGGRSKNEQVSQRTLFNLRRESRKNFFGGKYNRIEARRKEHSRHVEHLFR
QCFPDGFLDPHDLLDNDLLTQEQYDSIVHVGWHTGDDTHPRDPFRTWLGDAFLVVQQPRF
VPRSNVYESVQDGELLGENRPGTIDDDERDRLSGVYHPISEKFKGYVRRDLLKPALWERV
QTILKRYNDLYRVPHDYRGAVYRYLRTQYIKTRAEDFRNLLHSSVELANEARGVKAQCDA
KLVQSHGIPIIGCTTTGLTKYRELLETLKPRVMLIEEAAETREANITSALFDSLEQLILV
GDHMQLAPHTDVPGLADEPFNLGVSLFERMVRLDIGHSVLTVQRRMVPEIRQILGPVYPT
LTDHPSVADEKVRPPVPGMGNFSTYFLCHSWPEDVTQHLSRVNRDEAQMIAGFVRYLVQN
GTSPEKITVLTFYKGQVGCIRERLSKDMILGNLHATKRYKICTVDGYQGEENDVVILSLV
RSSAADAPSRVGFLANQNRAVVAISRARRGFYIFGNYWNLIRASPLAKKIWKPVTDVIVN
QQRCHRSLRLTCQQHGAVTHIRGQGDWDSIHGGCRAKCTYVAPHSQLDCKKPCARRTPCG
HKCSELCGKPCRCALGCKGAIASSHRQKKQADTFASLEGWMEMNAPQLQPSKPREAPRFI
DEEWDVGSGWESDGESDALESRRGNKNIPTMARSVSAGQPGPQTRLGFGGDYDDDFLGDI
YSSDERDRRAKPSINRKPESAAPVRPEIVSPRPKALEATVTIKHVFKEVVVDKNLKRLPV
RVVHSYSSSGAGGEATPLPVSTPPPLADGNSSASDVLLPSPAGDEGIRGEVVILDLNTGH
DTIGLEDFLRQMGQGEEEDGKGKEEIGVAKICNGVAWAEEDDDDDEDGEEYEEEEDDIDS
ETVNLIEL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgttctcagttccttgggatcaggtccccgagtgcccgacttcggctgagctc
ctatcttctgagccccggaagctacccatcaacgatgtcaaccacacgccgggtgacaag
gccagatacctcgagacccaataccgtctcatccgatatgagggtgtcgagctgctgcgc
cgagcgatccatgaatatcgcgaagatcccaaaatgcaggaatcctccgagactgccatc
tataccgatgtcacggtccacggataccaggtgactcgcctcggcacattgtgccgcatc
ggtttcttcccagacaggacggacaaacggattcgatggagccactccccccgcttaacg
cctggaaccgtcgtggccctgtccacgcctcgagacaatttcaacaccatctgcagaatc
gctacagtaatccaaagattcgtcaccggcggtctagagccagacacaaaggcaggcgag
cccgtgaccacgcctcctcgcattgacatcgcttgggccgatcctgttgatgcggttcta
gaccccgcaaagcatatggtcatgatcgaagccaaggccggctactatgaatcagtgcga
cataccatgcgcggtcttcaactttggtctaataaggattcacgcttcgatcgatatctc
atcatgggagccaaggatgctagccctccagaatacattgagcggctcaagaacctcatt
gacttcagcccagtcctctcacaacccctccagccccagaacaaaaagaagaagaacccc
aactccaacaaaagccaagtgaagactttaaatgggaagggaatttcgacgtcgatcaat
atgagccgcccattccccccagagatgtccgccctcacgggaatggacgagtctcagctt
ggagccatccgaaatatcttgacctccgagttccccatcgttcagggtcctcccggcacc
ggcaagacgtttgtctctgtgtcagccatcaggattcttcttcggaatctcgactggaag
acacccatcgtgattgccgcgcagaccaaccacgccctagaccaacttctcgttctcgtg
caccaggcgaccaaggctccctttattcgccttggaggtcgttccaagaacgagcaggtc
agccagcgcacccttttcaacctccgccgagaatctagaaagaactttttcggtggcaag
tacaaccgcatcgaggctcgccgaaaggagcattcccggcatgttgaacatcttttccgc
caatgtttccccgacggcttcttggatccccatgacctgctcgacaatgaccttctcact
caggagcagtacgactcgatcgtccatgtcggttggcataccggcgatgacacgcatccg
agagacccatttagaacgtggcttggggatgcattcttggtggtgcagcagccccggttt
gtcccccggtccaatgtgtacgaatcggttcaggacggagaacttcttggcgagaatagg
cccggcacgatagacgacgacgagagagatcggctgtctggagtgtatcacccgatttcg
gaaaagtttaagggatacgtccgaagggaccttttgaagccggcattgtgggagagggtt
cagacgatcctcaagcggtacaacgacctttaccgagtgccccacgactatcgcggtgct
gtataccggtaccttcgtacccaatacatcaagaccagggcggaagattttcgaaactta
ctgcactcatccgttgagcttgccaacgaggcaagaggggtaaaggcccaatgcgatgcg
aaactggtccaatcccacgggatccccatcattggatgcacgaccacgggcctaaccaag
taccgcgagctgctcgagacgctgaagcctcgcgtgatgctcatcgaggaagccgccgaa
actcgagaagcaaacattacctcggcccttttcgattccctcgagcagctcatcttggtc
ggggaccatatgcagctcgcaccgcacacggacgtaccaggactagccgacgaacctttc
aacctcggcgtgtcgctcttcgaacgcatggtcaggctcgacataggacattccgtgctg
accgtccagaggcgaatggttcccgagattcggcaaatcctgggacctgtctaccccacg
ttgacggatcatccctctgtggccgatgagaaggtgcgaccgcccgtccccgggatgggc
aacttcagtacctacttcctttgccacagttggcccgaggacgtgactcagcacctgagc
cgggtcaaccgcgacgaggcacaaatgattgccggcttcgttcgctacctggtgcaaaat
ggaacctcgcccgaaaaaatcaccgtccttactttttacaagggacaggtgggatgcatc
cgcgagcgcctctccaaggatatgatcctaggcaacctccacgccacgaagcgatacaag
atttgcaccgtagacggctaccagggcgaggaaaacgacgtggtcatcctctcgctcgtt
cgtagctctgccgcggacgctccgtcccgcgttggcttccttgctaaccaaaaccgtgcc
gtcgttgctatcagtcgggcgcggcgtggcttctacatctttggcaactactggaacctc
atcagggcgtccccgctggcaaagaagatctggaagcccgtgacggacgtcatcgtcaac
cagcagaggtgccatcggtcgttgcggttgacgtgccaacagcatggagccgtcacgcac
atcaggggccagggagactgggacagcattcacggcggctgtcgtgcgaagtgcacttac
gttgctccccatagccaactcgactgcaagaagccttgcgcgcgtcgtaccccttgtggc
cacaagtgctcggaactctgcggaaaaccctgccgctgtgccctcggctgcaaaggagcg
attgcatcctcgcaccgtcaaaagaagcaagcggacacgtttgcgagcctcgagggttgg
atggagatgaacgcaccgcagctgcagccgtcgaaaccgcgtgaggcgcccaggttcatc
gacgaagaatgggacgtcggatctggctgggagtctgacggagaaagcgatgcgctggaa
tctcgaaggggaaataaaaatattcccacgatggcgcgttcggtctcagctgggcagccg
gggccacagacgaggctaggcttcggcggggactatgatgacgacttcctgggcgacatt
tacagcagcgacgaacgcgatcggcgggctaagcccagcatcaatcgcaaacctgagtct
gctgctccggtgaggcccgaaatagtgtcgccgcggccaaaggctctagaagccacggtg
actatcaagcatgtctttaaagaggttgtggtcgacaagaacttgaagaggctgcctgtt
cgggtcgttcacagctacagctcgagcggcgcgggaggcgaggcgacgccccttccggtg
tcgactcctcctcctcttgctgacggaaactcttctgctagcgacgttctgctgcccagt
ccggccggcgatgaaggaattcggggagaagtcgtgatcctggacttgaacactggtcac
gatacaattggactcgaggactttttgcggcagatgggtcagggggaagaagaagatgga
aaaggaaaggaagaaatcggggtagcaaagatttgtaatggtgtggcgtgggctgaggag
gacgatgacgacgatgaggatggcgaagagtacgaagaggaggaggacgacattgattct
gagactgtcaatttgatagagctctag
DBGET
integrated database retrieval system
