Scedosporium apiospermum: SAPIO_CDS5976
Help
Entry
SAPIO_CDS5976 CDS
T06367
Name
(RefSeq) hypothetical protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
sapo
Scedosporium apiospermum
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sapo03041
]
SAPIO_CDS5976
03009 Ribosome biogenesis [BR:
sapo03009
]
SAPIO_CDS5976
Enzymes [BR:
sapo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAPIO_CDS5976
Spliceosome [BR:
sapo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
SAPIO_CDS5976
Ribosome biogenesis [BR:
sapo03009
]
Eukaryotic type
Pre-60S particles
Helicases
SAPIO_CDS5976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP1_cat
DEAD
Helicase_C
LNS2
Archaeal_Big
Motif
Other DBs
NCBI-GeneID:
27725048
NCBI-ProteinID:
XP_016642507
UniProt:
A0A084G5U6
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MTVSHRKRSIDDDFVYTIEDSDAVPDEEDLVPEPPKKKAKSSKKNKKGGKDAEDSTEGLW
GKNDEDDGAMASDFEFAPDGINDLGDGDFDGWGFEGAKKGVDGDKRGVDLDAIIQRRREK
KEQKKKSKKGTASESESDGDNEADLEADVESDAELDLDDADDEVLADDAFGMDVDSEYEE
EEQETVENEDDGASGDEDAGSPAEETDEGEEEEEVNDDDDDEEEEEEDAEELAKREAFFA
PEEPTQDVGKKGKDGSFQSMSLSRPVLRGLGAAGYTKPTPIQSKTIPIALLGKDVVGGAV
TGSGKTAAFILPIIERLLFRPKKVPTSRVVVLTPTRELAIQCHAVATKLASFTDIKFTLA
VGGLSLKAQENELRLRPDVIIATPGRFIDHMRNSMSFTVDTVEILVLDEADRMLEDGFAD
ELNEILTTLPKSRQTMLFSATMTSSVDQLIRVGLNKPVRLMVDSQKSTAGTLTQEFVRLR
PGREDKRMGYLVWLCKNVYHDRVIIFFRQKKQAHFARIVFGLLGLSSAELHGSMNQAQRI
ASVETFRDGKVSYLLATDLASRGLDIKGVDTVINYEAPQNLEIYVHRVGRTARAGRSGNA
CTLAAEPDRKVVRAAVKAGKAQGAKITSRVIDPSDADKWQKKIDDMEDEVEEIMQEEKEE
KQLAHMEMQVKKGENLIEHEAEIKGRPKRTWFETEHDKKKAKEAGRTQLNGLRESLKKKH
GGKTLSNKDKKKLDAKATRAEGPTWKKGRAERDGKGAVLELKKQPKAKVSKPPKSRLGSK
GQGLAKSKGVPRGKGKGKPKGGRSSIIKIVLHPRGHTKLALNYNPWHSTGPILSLNTKTR
YDLPFTVALFRRRSPHNKRELLRYLVPHTLRVRYQERVLLFHLDVLPKLKYSAQSRIHTF
LLWRYRRRLEKKPGVLDLVRRQGAPSAFAPRRATQPRGVGLIGPKKMLPTSSGGAGSAAQ
GGRYGGSGGGYDSDGAPSRTSRRMRLAAMAGSMYRAGASAVSEIKESYAQTRTRAFDPLE
HERQSIPGSFPEARVTVQGTDQMILFPTYAKRHVKHDRNMPPPPVSDIPPGGMRDDDYWY
TGWEREWDEDAVVDVDVRGWIYSPHRGPLTRRSRIMLGLARQLSGIPRLDGPQNAGAVDN
SIGPSRPSHEDLRVQEKIALEAAKIEQRGRAERKAASHGEYSEGPDVPYQPGPNGFNGTS
HSSTRASLTPPHRQGTASSNGTTDLTEAELATANTNLAARIAPFLTVPFAELPVTIFFYN
DSCSQSRTVMTNASGQFNVRAALPFVPTYVRVLANEDLSTLQAVKVTESAGVSVISDIDD
TIKRSNISGGAREIFRNTFIRDLPTLTVDGVKEWYNRMHSMGVGIHYCSNSPWQLFPVLA
AFFKISGLPPGSVHLKAYNGMLQGIFEPVAERKKPTLERILSDFPERKFILVGDSGEADL
EVYTELAVAHPKRILAIFIRDVTTPEQPGFFDSSVGSGLLRTEKEMPDTERRSSPNSVGD
RPVDRPQLPPRAPAAAEVPTGNLIDFSDDEKPASPKEAPTPPNKPRQLSAFGASSRAPPR
PAKPAALRSGSSESKISTHLDESHPGAGRTSSAPPPPPPPRSRKPVGISAGENTRHPLSQ
IQTLSAQNAAAPRKYPSGELQYASSSPTSSTSRQTPPPPPPRRTGTSSSIQSNRVGAEFS
TPRDISRPHQPPPRSSGHTPLSSTPPSGRTPPNGMATATPDWNSNTQQGSAATGVNKKLE
LWRRRLARAHEILDEQGVALYTWRRGYDVIEEATGIINAALEEGNQASAQQKRSG
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgacggtctctcacaggaaacggtcaattgatgacgatttcgtctacaccatcgaagac
tccgacgccgtcccggacgaggaggatctggtgcccgagcccccgaaaaagaaggccaaa
tcttccaagaaaaataagaagggcggaaaagatgccgaggattccacagaaggcctttgg
ggtaaaaatgacgaggacgacggtgccatggcctccgatttcgagtttgccccggacgga
attaacgacctcggtgacggcgacttcgatggttggggctttgagggtgctaagaaggga
gtggacggagataagaggggcgttgatctagacgccatcattcagaggaggagggagaag
aaggaacaaaaaaagaaatcgaagaagggaaccgcgtctgagtcggagagcgatggtgat
aacgaagcagatctcgaggctgacgtcgagagcgatgcggagctcgacttggatgatgcc
gacgacgaggttttagccgatgatgcctttggcatggatgtcgactcggagtatgaagag
gaagaacaggagacagtggagaatgaggacgacggggcctccggtgacgaagacgctggc
tcgcctgctgaggagaccgacgaaggagaggaggaggaggaggttaatgacgatgatgac
gatgaagaagaagaagaagaagacgcggaggagttagcgaaaagagaagccttctttgcg
ccggaagagccgacacaagacgttggcaaaaagggcaaggacggttctttccaaagtatg
tctctcagtcgaccagtgcttcgcggcctcggcgcagccgggtacacaaaacccacgcca
attcagtctaagaccattcctattgccctcctcggcaaggatgtcgttggtggagccgtg
accggctcaggaaagacggccgcattcatcctacctatcatcgagagacttctctttagg
cccaagaaggtacctacaagtcgtgtcgtcgtccttaccccgactcgtgagcttgcgatt
cagtgtcacgctgttgcgacgaagctcgcttcgtttaccgatatcaagttcacactcgct
gttggtggtttgagtctaaaggcgcaggaaaacgagcttcgcctacgacccgacgtcatt
atcgcaactcccggtcgattcatcgatcatatgcggaattctatgagtttcaccgttgac
accgtggagatcttggttcttgatgaggcagatcgaatgcttgaggacggtttcgccgac
gaattgaacgagattcttacaacactacccaaatctcgccagactatgttgttttcggct
actatgacatcctccgtcgatcagctcatccgtgtcggtttgaataagcccgtgcggctg
atggttgattctcagaagagcacggcagggactttaacacaggagtttgtacgattacgg
cctggaagggaggacaagcgtatgggctatctagtatggctctgcaaaaacgtataccac
gatcgagttatcatctttttcaggcagaagaagcaggcacatttcgctcgaatcgtcttt
ggattacttggcctatcatccgcggagctgcacggcagcatgaatcaagctcagagaatt
gcaagcgttgagacgttcagagatggcaaggtgtcgtacctcttagcaaccgatcttgcc
tctcgaggtttggatatcaagggagtcgacaccgtcatcaactacgaagcgccgcagaac
ctggagatttacgttcacagagtcggtcgaactgcgcgagccggaagaagcggtaacgcg
tgtacgctagcggcggaaccagatcgtaaggttgtacgagctgcggtgaaggctggcaag
gcacagggagccaagataacgagcagggtgattgatccttcggatgccgacaagtggcag
aagaagattgacgatatggaggacgaagtggaagagatcatgcaagaagaaaaggaggag
aagcagctcgcgcatatggagatgcaggttaagaagggtgagaacttgatcgagcacgag
gccgaaattaaggggcggccgaagaggacgtggttcgagactgaacatgacaagaagaag
gccaaggaggctggccggacgcagctaaacggcttgagggagtctttgaagaagaaacac
ggcggcaagaccctgagcaacaaggacaagaagaagctcgacgccaaggcgaccagagcc
gagggaccgacctggaagaaggggcgagctgagcgagatggcaagggcgctgtccttgaa
ctgaagaagcaaccgaaggcgaaggtatcaaagcctcccaaatcgcgactcggctccaag
ggacaggggcttgccaagagcaagggggttccgaggggcaagggcaagggcaagcccaag
ggaggccggagttctatcatcaaaatcgttctccatcctcgaggccatacgaaacttgct
ttgaactataacccttggcattccactggcccaattctgtctttgaatacgaaaacccgg
tacgatctccctttcaccgtggctctctttcgccgacgatcaccccataacaaacgagag
ctcctccgctatctcgttccccacaccctccgcgtccgataccaagagcgcgtcctcctc
ttccacctcgacgtcctccccaagcttaaatacagcgcgcaatcgcgaattcatactttc
ctcctctggaggtatcggcgccgactcgagaagaagcctggtgtgctcgaccttgtccgt
cggcaaggggccccgtcggccttcgccccgcgacgtgcgactcagcctcgcggggttggg
cttatagggccgaagaagatgctgccaacatcgtcaggaggagccgggtcggcggcgcaa
ggcggcaggtatggggggtccggtggtggatacgactcggatggggcgccgtcgaggaca
tcgaggaggatgaggctggcggctatggcggggtcgatgtacagggcgggagcctctgcc
gtgtctgagattaaggagtcgtatgctcagacaagaacgagggcctttgatccgttggaa
catgagagacagtcgataccgggctcgtttccggaggctcgtgtcacggtacaggggacg
gaccagatgatactgtttccgacctacgcgaagcggcatgtgaagcatgataggaatatg
ccgccgcctcctgtatccgatattcccccgggtgggatgagagacgacgattactggtat
accggttgggaacgtgagtgggacgaggacgctgtggtcgatgttgatgttagaggctgg
atatattctccacaccggggcccattgacgaggaggagccgaatcatgctggggcttgcg
cgacaattaagcggtattccgaggcttgatggaccgcagaacgccggcgcagttgacaac
tctattggcccatcgcggccctctcatgaggatcttcgggtgcaggagaagattgctctt
gaggctgccaagatcgaacagaggggccgagcggagaggaaagcggcatctcacggcgaa
tacagtgagggcccggatgtaccataccagccagggccaaatggcttcaatgggacttct
cacagctcaacgcgagccagtctcacaccccctcatcggcaaggaacagcctcatccaat
ggaacaactgaccttacggaagctgagttggcgactgccaacactaacctggcggctcgc
attgcgcctttcctaacagtacccttcgccgaacttcctgttaccattttcttctacaac
gactcttgctcccagtcacgtacggtaatgacgaatgcttcagggcaattcaatgtccgt
gctgctctccccttcgtgcccacttacgtcagggtactggcaaatgaggatctctcgacg
ctccaggccgtgaaggttaccgagtcagcgggcgtgagtgttatcagcgacatcgacgat
acgatcaagcgctccaatatctcaggcggcgcgagagagatctttcgaaacacattcatt
cgggacctaccgactcttactgtcgacggagtaaaagagtggtataacagaatgcactca
atgggcgtaggtatccactactgctccaacagtccttggcaactcttccccgttctcgcg
gcgttctttaagatttccgggttgcctccgggatctgtgcatctcaaggcctacaacggt
atgctgcaagggatattcgagcctgtggcagaacgcaagaagccgacgctcgagaggatc
ctgtctgattttccagagcgcaagtttattcttgttggcgatagtggagaggccgatctt
gaggtctacaccgagctcgcagtggcgcatcccaaacgcatccttgccatttttatccgg
gatgtgactacccctgagcagcctggattcttcgactcatctgttggctcgggtttactc
aggactgaaaaggaaatgccggatactgaaaggagaagctctcccaattcggttggcgac
aggccggtcgaccgacctcaacttcctccaagggcaccagcagctgcggaggtacctact
ggaaacctgattgacttttcagacgatgagaagccagcttcccctaaggaggcaccaacc
cctcctaacaagccaagacagcttagtgctttcggagcttcctcccgagcgcctcctcgt
ccagccaaaccagctgcattacgaagtggctcgtctgaaagtaaaatctcgacgcattta
gacgagtcacacccaggagcaggaaggacgtcctcagcgcccccgcccccgcctcctcct
cgtagccggaagcctgtgggcatatccgctggagaaaatactcgccatcctttatcacag
atccagactttatctgcacagaacgccgccgccccgaggaaataccccagcggtgagctg
cagtatgcatctagtagtcccacaagctctacatcgaggcagaccccgccgccaccgcct
cctcgacgcacaggtaccagctcaagcatccagtctaaccgagttggggctgaatttagt
accccacgggacattagtagaccacatcaaccgccccccagaagctcgggccacacccca
ttatcgtcaacacccccatctggccgtactccccctaacggcatggcgacagctacacca
gactggaattcgaacacgcagcaaggttcggcagcaacgggggtaaacaaaaagctagaa
ctgtggcgccgacgcctcgctagggcacatgagatccttgacgagcagggtgtcgcgctg
tatacctggagacgaggctacgatgttattgaggaggcgacggggatcatcaacgctgcg
ctcgaggagggcaaccaggcctcagcgcaacagaagcgcagtggttag
DBGET
integrated database retrieval system
