Scedosporium apiospermum: SAPIO_CDS6646
Help
Entry
SAPIO_CDS6646 CDS
T06367
Name
(RefSeq) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SAPIO_CDS6646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sapo03041
]
SAPIO_CDS6646
03009 Ribosome biogenesis [BR:
sapo03009
]
SAPIO_CDS6646
Enzymes [BR:
sapo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SAPIO_CDS6646
Spliceosome [BR:
sapo03041
]
Complex A
U2 snRNP components
U2 related factors
SAPIO_CDS6646
Complex B
SAPIO_CDS6646
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
SAPIO_CDS6646
Ribosome biogenesis [BR:
sapo03009
]
Eukaryotic type
90S particles
Helicases
SAPIO_CDS6646
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
WHD_HA2
SRP54
Flavi_DEAD
Cas3-like_C_2
NB-ARC
AAA_23
Motif
Other DBs
NCBI-GeneID:
27725718
NCBI-ProteinID:
XP_016641639
UniProt:
A0A084G3C8
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MGDNSDTKGTKRRSAESSEDSRKKTKMGGVSLKTGGEQYNPYLAHMAADGASNGDGDVPA
NSPFAGFKRRATTSQQAEKVEDMDVNPFTNKPHTTQYFNILQTRRDLPVHKQRQEFLDKY
HSSQILVFVGETGSGKTTQIPQYVVYDELPQLNKKLIACTQPRRVAAMSVASRVADEMDV
VLGEEVGYSIRFEDMTSSKTILKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDI
LMALLKQIAIRRPELKIIIMSATLDAQKFQKYFHDAPLLAVPGRTHPVEIFYTPEPERDY
VEAAIRTVLQIHGSEPDGDILLFLTGEEEIEDACRKISIEADEMIREMGCGPLAVYPLYG
SLPPYQQQKIFDKPPPPLRKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNP
RSRVESLLVSPISKASAQQRAGRAGRTKPGKCFRLYTEAAFKKELIEQTYPEILRSNLAN
TVLELKKLGVDDLVHFDLMDPPAPETMMRALEELNYLACLDDEGELTTLGSMASEFPLDP
ALAVMLISSPEFYCSNEILSITSLLSVPQIFMRPANNRKRADDMKALFAHRDGDHLTLLN
AYHAFKGQANNPEADVKKWCHEHFLSYRHLSSADNVRTQLKRIMEIQNLELVSTDFGDPD
YYTNIRRCLLTGFFMQVAMRNPAAKVYCTIKDNQVVRLHPSTVLKMDPDWVVYHEFVLTS
QQYIRTCTYIKPEWLLEIAPVYYDIDTFEPGEVRSALMRVVARRKRREEIARNPR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaactcagacaccaaaggcacaaaacgccgcagcgcagagagttccgaagat
tcgaggaagaagacgaagatgggcggcgtttcgttgaagaccggcggcgagcagtacaat
ccgtaccttgcgcatatggctgccgatggcgcatcgaacggcgatggcgacgtacccgcg
aactcgcctttcgcgggctttaagcgccgcgcgacaacatctcagcaggcggagaaggtt
gaggatatggatgtgaatcctttcaccaacaagcctcacacaacgcagtacttcaacatc
ttgcagactcgacgagacctcccggtacacaagcagagacaggaattccttgacaaatat
cactccagccaaatccttgtctttgttggagagacgggttccggaaagacaacccaaatt
cctcaatatgtcgtctacgacgagttgccccagctcaacaagaagctcatcgcttgtacc
cagccccgccgagtcgccgccatgtcagtcgctagccgcgtggcagacgagatggacgtc
gtgttgggtgaagaggtcggatatagtattcgatttgaggatatgacctcgtcgaagacg
atcctcaagtacatgaccgacggtatgcttctacgggaggctatgcacgatcacgaaatg
tcgcgctacagctgcattattctcgatgaggcccacgaacgtacccttgccaccgatatc
ctgatggcgcttctgaagcagatcgcgattaggcgtcccgaactgaagatcatcatcatg
tcggctacccttgatgcgcagaagtttcagaagtatttccacgacgcgcctcttttggca
gtccctggtcgaacgcaccccgtggagattttctacacccccgagcctgagcgggactac
gtcgaggcggccatccgaacggttttgcagattcacggatccgagcctgatggcgatatc
cttctgttcctgactggtgaggaggagatcgaggacgcttgccgaaagatttcgatcgag
gcagacgagatgattcgcgaaatgggttgtggtcctctcgccgtctatcctctgtacggt
tccctacccccctaccaacagcagaaaattttcgacaaacctccgcctcccctccgcaaa
ggcggaaggcctggtcgcaaatgcatcgtggctaccaacatcgccgaaaccagtttgacc
attgacggtatcgtctatgttgtggatcccggattcagcaagcagaagatttacaaccca
cgcagccgcgtcgaatccctcctcgtttctcccatctcaaaggcctcagcgcagcagcgc
gctggtcgtgccggtcgtaccaagcctggcaagtgcttccggttatacacggaagccgct
ttcaagaaggagctcattgagcagacatatcccgagattctccgatccaacctggctaac
acggtcctcgagctcaagaaacttggtgtcgatgatctagtgcactttgacctcatggac
cctcctgcccccgaaaccatgatgcgtgcgctagaagagctgaactacttggcatgcctt
gatgacgagggtgagctcaccacccttggcagcatggcttctgagttccctcttgatccc
gcgctcgcggtcatgcttatctcatcacccgagttttactgctccaacgagattctctcg
atcacgtcgctcctttccgtgccccagatcttcatgagaccggcgaacaaccgaaagcgt
gccgacgacatgaaggccctatttgcccaccgcgacggagaccacttgacgctcctcaac
gcataccacgccttcaagggtcaagcaaacaaccccgaggccgatgtgaagaagtggtgc
cacgagcatttcctttcgtaccgtcatctttccagcgccgacaatgtgcgcacgcagctc
aagcgtatcatggagatccaaaacctggagttggtatccacggactttggtgaccccgac
tattacaccaacatccgccgttgcctcctcacgggctttttcatgcaagtggcgatgcgg
aatcctgccgcgaaggtatactgcacgattaaggacaaccaggtcgtgcggctccatcct
tcgaccgtgctcaagatggaccccgattgggtcgtctaccatgagtttgtcctgacgtca
cagcagtacattcgcacctgcacctacatcaagccagaatggctacttgaaattgcccct
gtctattatgacatagacaccttcgagcccggcgaggttcgttcagcgcttatgcgagtg
gtcgccaggaggaagcgtcgggaggaaattgcccgcaaccctcgttag
DBGET
integrated database retrieval system
