Scedosporium apiospermum: SAPIO_CDS7159
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Entry
SAPIO_CDS7159 CDS
T06367
Name
(RefSeq) WD domain-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SAPIO_CDS7159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sapo03009
]
SAPIO_CDS7159
Ribosome biogenesis [BR:
sapo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SAPIO_CDS7159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
Cytochrom_D1
DUF7165
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
27726231
NCBI-ProteinID:
XP_016640897
UniProt:
A0A084G186
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MPHSDHGGHLAKRQKRDSQLKAVHPSSSKKKASAIFAPFRTIGLVSPTSVPFTSVPLGKT
TFQITTSVGRALQTYDLKRGLNLVFVTRPETPSDITATVAWKQKVLAAWGDSSQSGTQGV
WIFQRGKKVDELEIPDDLDEPIRQILVFGSWIVASAVTRIEVWKSTTLEHYTTIRTVPAA
EGGNEVTGGVTNMPTFLNKIFVGRKDGWVEIWNVSTGKLIYTIVPPIKNAGSVTCLQPST
ALALLAVAYSNGPLVVHDVIHDRPLIELNAGTPTTPVCAITFRSDGMGAGQDGRKDGIMA
TATSATGDITFWDLNGGGRVSGILRSAHNPPSRAGSVIGGGISKIEFLYGQPVIVSSGLD
NSLKTWIFDKTPFSPIPRILHTRSGHAAPVNCLQFLPSDFDGAEAGNKWLLSGGSDRSLW
GWSMRRDGQSTELSQGNIRKKAKKYGILSTSALAHGSTTTLEDIKAPEITCIASSLNRDG
GIGALPGKQAIWTRASRKERARGVKHDAEVSRMTGWESVVTGHKGDSFARTWFWGRKRAG
RWMFETGDGSSVTAVAISPCGSFALVGSAGGTMDMFNLQSGIHRLQFPSKLTPAQARQLK
MQQLKQVDDVVHLQTKFASSFAPGTGRHTKAITGIIVDSTNKFVVSCSLDGKVKFWDFLT
GNLMHEIDWAPMTAITGCRYHAPNDLIAFSCDDNSIRVVDVETRRTIREFLGFEKDVTDF
CFSNDGRWIIAASDDCTLRVWDLPTSHLIDAIRFEHPCKAVAMSSSGEYLAACIEGQMGV
GIWTNKSLFRHVPTRQISAKEIAAAVVPTVSGEGNEGLLDAAFEEDAESVDEPAVIVPDV
DQLSTEMTTLSLVPKSRWQTLLHLDLIKQRNKPKEAPKLPEKAPFFLPSLSGKGSGAPKQ
IEDAAKNEGSEESRSRILKVEMAARQEETFTTKLLAGAARGNYDDFIDHLKSLPPSAADL
ELRSLSADDPEKNELLYFIRALTSRLESRKDYELTQAWMTVFLRLHFDVVTEHESILEAL
RVWREVQERESSRLDGLVGYCGGVVGFLRSPRT
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgccgcactcggatcacggcggccatctggctaaacgccagaagagagattctcaatta
aaggctgtgcaccctagctccagcaaaaagaaggcctctgccatctttgccccctttcga
actatcggtttggtgtctcccacctctgtcccattcacctccgtccctctcggcaagact
acttttcagatcaccacctctgtcggtcgagctctgcagacctacgatctcaagcgcggc
ttgaaccttgtcttcgttactcgccccgagaccccgagcgatattactgccactgtagca
tggaagcaaaaggttctcgcagcatggggtgattcgagtcaaagtggcacccagggcgtc
tggatcttccagcgaggaaagaaggtcgacgagctcgaaattcctgacgatttagatgag
ccgattagacagatcctcgtcttcgggtcgtggatagttgccagcgctgttacaaggatc
gaggtctggaaatcgacgacacttgagcactacacgactatccgaactgttcctgctgct
gagggcggaaacgaggtgacgggtggtgttacgaacatgcctaccttcctcaacaagatt
ttcgtcggccgcaaggatgggtgggttgagatatggaacgttagcacgggaaagctaatt
tatactatcgtgccccccatcaagaacgcaggctctgttacatgcctacagccctcgacg
gccctggctctcctcgctgttgcctactctaacggcccgctcgtcgtacatgatgttatc
cacgaccggccacttatcgagctcaacgctggcacccccactactcctgtctgcgccatt
accttccgatccgacggtatgggcgcgggacaggatggacgaaaagacggtatcatggcc
acagccacgtcagccactggcgacatcaccttttgggacctcaatggaggtggcagggta
tctggtattctacgaagtgcccacaatcccccatcccgtgctggatccgtcatcggcggc
ggtatcagtaagattgaattcctatacggccagcctgtcatcgtgtctagcggcctcgac
aactctctaaagacctggatctttgacaagacgccattctcacccattccgagaattctt
cacacgaggagcggacatgctgcgccggtcaactgcctacagttcttgccttcggatttc
gatggtgccgaagccggcaacaagtggcttcttagcggtggaagtgataggagcctgtgg
ggatggagtatgcgaagggatggccaaagcaccgaactgagccaaggaaatattcggaag
aaggccaagaaatacggtatcctgtctacatcggccctggcgcacggctctacgacgacg
cttgaagatatcaaagctcccgaaattacgtgcattgcaagttcgctcaatcgtgacggc
ggtattggcgctcttcccggaaagcaggcgatatggacgcgagcttcgaggaaggagcgg
gctaggggcgttaagcatgatgctgaggtgagccgcatgaccggttgggagagtgtcgtg
acgggccacaagggcgattcctttgccaggacgtggttctggggccgcaagagggcgggt
cgctggatgtttgagacgggcgacggaagcagtgtgacggccgtcgccattagcccgtgt
ggcagctttgcgctcgtcggttccgctggtggtacgatggacatgttcaacctgcagtcc
ggaattcatcgtctacagttcccctcgaaactcacgccggctcaggcgagacagctaaag
atgcagcagctcaagcaggtggacgacgtggtacatctccaaaccaagttcgccagcagc
tttgcacctggaaccgggagacacaccaaggcaatcaccggtattatcgtcgactcgaca
aacaagtttgtcgtgtcgtgctctctcgacggcaaagtcaaattctgggatttcctcacg
ggtaatctcatgcacgagattgactgggcgccgatgaccgccatcaccggctgccgctac
cacgcacctaacgatcttattgcgttttcttgcgacgacaactcgatccgcgtcgttgac
gtggagactcggcggacgatccgagagttcttgggcttcgagaaggacgtgacggacttt
tgcttctcgaacgacggtcggtggatcatcgcggcatcggacgactgcacccttcgcgtg
tgggatttgcccacgagccacttgatcgacgccatccgcttcgagcacccttgcaaggct
gtagccatgtcatcgagcggcgagtatctcgctgcctgcatcgagggccagatgggcgtc
ggaatatggacgaacaagtcgctcttccgccacgtgcccacgaggcaaatctcggcgaag
gagatcgccgccgccgttgtgcccaccgtctcgggcgagggcaacgagggtctcctcgac
gccgcgttcgaggaagacgccgagtcggtggacgagccggccgtcatcgtgccggatgtg
gatcagctgagcacagagatgacgacgctgagcttggttcctaagtcgaggtggcagacg
ctgcttcacctggacctcatcaagcagcgtaataagccgaaggaggcacccaagctgccc
gagaaggcgccgttctttttgccgtctttgagcgggaagggatcgggcgcgcctaagcag
attgaggatgcggcgaaaaatgagggttcggaggagtctaggtcgaggatacttaaggtg
gagatggcggcgcggcaggaggagacttttactactaagcttcttgcgggagccgctagg
ggaaattacgacgactttatcgaccaccttaagtcccttcccccctcagcggccgacctc
gaactccgctccctctccgccgacgacccggaaaagaacgagctcctctacttcatccgg
gctctcaccagccgactagagtcgaggaaggactacgagctcacgcaggcgtggatgacg
gtgtttctgcggctgcacttcgacgtggtcacggagcacgagagcatcctcgaggcgttg
agggtgtggagggaggtgcaggagagggagagcagtcggttggatgggctggtcgggtat
tgtggtggggtggttggctttcttcggagccctaggacgtaa
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