KEGG   Scedosporium apiospermum: SAPIO_CDS7220
Entry
SAPIO_CDS7220     CDS       T06367                                 
Name
(RefSeq) hypothetical protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
sapo  Scedosporium apiospermum
Pathway
sapo03018  RNA degradation
sapo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sapo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SAPIO_CDS7220
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAPIO_CDS7220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sapo03019]
    SAPIO_CDS7220
   03041 Spliceosome [BR:sapo03041]
    SAPIO_CDS7220
Messenger RNA biogenesis [BR:sapo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SAPIO_CDS7220
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SAPIO_CDS7220
Spliceosome [BR:sapo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SAPIO_CDS7220
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 27726292
NCBI-ProteinID: XP_016640944
UniProt: A0A084G1D3
LinkDB
Position
Unknown
AA seq 127 aa
MLPLGLLNAAQGHPILVELKNGENLNGHLVMCDTWMNLTLKEVVQSSPEGDKFVRLPEAY
VKGNNIKYLRVPDEIIDIVKESQQSQQAGFRGGRGGQHRGEHGGRGERGGRGGGRGQGRG
RGRGRGA
NT seq 384 nt   +upstreamnt  +downstreamnt
atgctacccctcggcctcctcaacgcggcgcaaggccacccgatcttggtggaactgaag
aatggcgagaacctcaacggacacttggtcatgtgcgatacgtggatgaacctcactctc
aaggaggttgtgcaatcgagtccggaaggtgacaagttcgtacggttaccagaagcctac
gtcaagggcaacaacattaagtacctgcgagtgcccgacgagattatcgacatcgtgaag
gagtctcaacaaagccaacaggccgggttccgaggcggaaggggtggacaacatcgggga
gagcacggcggtcgcggggagaggggaggacggggaggtggccggggccagggccgcgga
agggggaggggtaggggtgcgtga

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