Scedosporium apiospermum: SAPIO_CDS7220
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Entry
SAPIO_CDS7220 CDS
T06367
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03018
RNA degradation
sapo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SAPIO_CDS7220
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIO_CDS7220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS7220
03041 Spliceosome [BR:
sapo03041
]
SAPIO_CDS7220
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SAPIO_CDS7220
mRNA degradation factors
5'-3' decay
Lsm complex
SAPIO_CDS7220
Spliceosome [BR:
sapo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
SAPIO_CDS7220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
27726292
NCBI-ProteinID:
XP_016640944
UniProt:
A0A084G1D3
LinkDB
All DBs
Position
Unknown
AA seq
127 aa
AA seq
DB search
MLPLGLLNAAQGHPILVELKNGENLNGHLVMCDTWMNLTLKEVVQSSPEGDKFVRLPEAY
VKGNNIKYLRVPDEIIDIVKESQQSQQAGFRGGRGGQHRGEHGGRGERGGRGGGRGQGRG
RGRGRGA
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgctacccctcggcctcctcaacgcggcgcaaggccacccgatcttggtggaactgaag
aatggcgagaacctcaacggacacttggtcatgtgcgatacgtggatgaacctcactctc
aaggaggttgtgcaatcgagtccggaaggtgacaagttcgtacggttaccagaagcctac
gtcaagggcaacaacattaagtacctgcgagtgcccgacgagattatcgacatcgtgaag
gagtctcaacaaagccaacaggccgggttccgaggcggaaggggtggacaacatcgggga
gagcacggcggtcgcggggagaggggaggacggggaggtggccggggccagggccgcgga
agggggaggggtaggggtgcgtga
DBGET
integrated database retrieval system