Scedosporium apiospermum: SAPIO_CDS7376
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Entry
SAPIO_CDS7376 CDS
T06367
Name
(RefSeq) mRNA cleavage and polyadenylation factor CLP1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SAPIO_CDS7376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS7376
Enzymes [BR:
sapo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
SAPIO_CDS7376
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
SAPIO_CDS7376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
MMR_HSR1
AAA_16
nSTAND3
FtsK_SpoIIIE
KTI12
CbiA
SRP54
AAA_24
AAA_18
MeaB
AAA_19
Zeta_toxin
AAA
AAA_28
FeoB_N
Motif
Other DBs
NCBI-GeneID:
27726448
NCBI-ProteinID:
XP_016641082
UniProt:
A0A084G1S1
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MAAIPGLGLMEEAAPAVSSTREIELPPFGQFCFEVGFGSPGLTVKLISGTAEKDGTELNL
NHPYHFSSIKTNILTLQGCKLEVDGTCDKEWVIKDVPPAENVPNMYVNIHFGLHHERLKA
AATGRTGPRVLIAGTPNSGKTTCVKTLASYATKRGDQPLVVNLNPDEGMLTLPGTLSAAV
FASMMDIESRQGWGAAPASGPGSIPPKLPIVHFYGHQNIEDDAGLYREITTTMAESVSAR
LSEDPNVKRSGLIIDTAGIQPDSMEGLDLLSHIISEFSVNIVITIDSQGLEEQLKEMLKD
EMAHSEEQIHIVNIFKSKSIPERDELWLLQEREADIKEYFFGDSRMVLSPSTQLVDFDSL
TIFKLPENGEYTPDAKALERVKPTADMVHWTLAIMQASVKDTAETIRTSLVLGFVYVAHV
DVDKSKIKLLAPLPGRLGDRPLILGKWPEPHVNLLG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctgctattcctgggctagggttgatggaggaagcggccccggccgtttcctctacg
cgagagatcgagcttccgccctttggacagttctgcttcgaggttggctttggtagcccc
ggtctgacggtgaagctcatctcgggaaccgccgaaaaggacggtaccgagctgaacctg
aaccatccgtaccacttctccagcatcaagaccaacatcctaactctccaaggatgcaag
ttagaagtcgacggaacctgcgacaaggaatgggttatcaaggatgtcccgcctgccgag
aacgttcctaacatgtacgtcaacatacattttgggcttcaccacgagcggctcaaggct
gccgcaacaggtcgcaccggccctagggtcttgatcgccggcacaccgaattcaggaaaa
accacctgtgtgaagacactggcttcctatgccacgaagaggggagatcaaccgttggtg
gttaacttaaaccccgacgaaggcatgttaacgctgccagggaccctgagcgccgccgtc
tttgcctcgatgatggatatcgaatcgcgacagggctggggtgcagccccggctagcgga
cccggatctatcccaccaaagttaccgattgtccacttctacggacaccagaatatcgag
gatgatgctggtctttatagggagataacgacgacaatggccgagtcggtatcggcaagg
ttgtctgaggacccgaacgtcaagagatctggtttgattatcgataccgcaggcattcaa
cccgatagtatggaaggcctggatctgttgtcgcacatcatttccgagttctcggtgaac
attgtaatcactattgactcacagggcctcgaggagcagctcaaggagatgctaaaggac
gaaatggcacattctgaagagcaaatacatattgtaaacatcttcaaatctaaatcgatc
cccgaaagggatgagctatggttacttcaagaaagagaggcggatatcaaggaatacttc
tttggcgattcgagaatggtgctgagtccttcaacacagcttgttgactttgacagcctg
acaatattcaagctccctgagaacggcgagtacacaccggatgctaaagcactggaaaga
gtcaagcctacggccgacatggtacactggacgctagctatcatgcaggcttcggtcaag
gataccgcggagacgatccggacgtctctcgttcttggattcgtgtacgtcgcgcatgtc
gatgttgacaagtccaagataaaactcttagcgccgctgcccggaaggcttggagatcga
ccgctcatccttgggaaatggccggagcctcatgtcaacctcctcggctga
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