Scedosporium apiospermum: SAPIO_CDS7577
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Entry
SAPIO_CDS7577 CDS
T06367
Name
(RefSeq) Topoisomerase II-associated protein PAT1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIO_CDS7577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS7577
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SAPIO_CDS7577
mRNA degradation factors
5'-3' decay
Decapping complex
SAPIO_CDS7577
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
OGG
Motif
Other DBs
NCBI-GeneID:
27726649
NCBI-ProteinID:
XP_016641245
UniProt:
A0A084G284
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MSFFGGFSGSRHNTSAPGFSQAHDPFMGLSNAAEGDDGALEFDDTYDGLGDQLDETDDAF
NDDTFGDSGAGNVGKDFDFFGRTAQVSGAIEEEHLRFSRQQPTAAKPTAPPVSAPVHATS
SVQYQYQPAKKPVRTGYEKYKDSEVVPDLHVDHSIWGTAPSKPAVQAVAQPAAQPPVSSG
RKVMSLEEVEAAMRAQAQKTPQPTSSQQGQAQGGQILVPENGDFLYAKIREPAQPSHGPS
TSQPGHVHSVQILQRPQSLDAKQQGPQMRQAPSPQQHPPSGPVQPTQILQNPNRISGDAA
RIGVPTHPTHVSHGSSSGIPHIPLQIQPHLSEEEKTAFLEQETRRAKRNHKIWLLSKDNG
LMTPQDKNFITRIQLQQLVTATGIATEEGEEASLNDDFYYQVHASIRAGHRQNPSQPLHN
FAQTYLYQTGSRHSGSRRHARAAENHVQRMEQQVQRAVEAAKNKPKNPQLVIAGSLGKIS
YSNAKTPKPLLNIKRQEGTGDAHRHAGSKKPHGTLDRKSVLRNIEKVYSTLMKLEDHARH
MPPPDPSLQAQHEQWVTTTKALNAELWDNLKVHEPIGATTLHPFIAFLSFNKGKKAIPRV
FRHLTFEQRATILTMIIFHLDQLDVVKGAQVNTGDTDLNAALREKIELFSVVVMPSIFQF
FNETNLDIVDGALDLINDKLSVDLIAKTRIGTSMLTLILSRAELLKQAGGGTPEQWSKWE
STFNTFFNIIEPTLPHIFPGSINSGEDIYVWQLLAAIGVSSSPEQQQRLVLAVKDRVMGT
VNHAKTLPQAIGAQRLSNVNLFMQSIGLDVELLG
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcttcggcgggttcagcgggtcccggcataacacctcggcgcctggcttttct
caagcccatgatcctttcatgggcctgtctaatgccgccgagggtgacgacggtgctctc
gagttcgacgacacttacgacgggttgggtgaccagctggacgagacagacgatgcgttc
aacgatgacacattcggcgattccggtgcgggaaacgttgggaaggacttcgacttcttc
ggccgcactgcccaggtttctggcgccatagaagaggaacacctccgcttctctaggcaa
cagcccaccgcagctaagcctaccgcgccccccgtctccgccccggtgcatgctacctcg
tccgttcaatatcaataccagcccgccaagaaacccgtgcggaccggttatgaaaagtac
aaggattccgaggttgtacccgacctacatgttgatcatagtatctggggaacggcgccc
tcgaaacctgcagttcaggcagtagctcaacccgctgcccaaccgccagtctcgtccggg
cgaaaggtgatgagtttggaggaagtggaggctgccatgcgcgcgcaggcccagaagacg
ccccagccaacttcgtctcagcaaggccaagctcagggaggacagattctagtgcctgag
aatggcgatttcctctacgccaagatacgggaacctgcccagccctctcacggaccatcg
acttcccagcccggccacgtccactcagttcagattctccagcgacctcagagcctggat
gctaagcagcaaggtccccagatgcgtcaggcgcctagcccgcagcagcatcctccttcc
ggtcctgttcagcctacgcagatcttgcaaaatccgaatcgcatctctggagacgctgcc
cgcattggcgttcccactcatccaacacacgtctctcacggctcaagctcgggaattccg
cacatccccctccagattcagccacatctctcggaagaagaaaagactgcattccttgaa
caggaaacgagacgtgcaaagagaaaccacaagatctggctcctttccaaggataatggc
ttgatgacccctcaggataagaatttcatcactcgcattcagcttcagcagcttgttact
gcaaccggtattgcaactgaggagggcgaggaggcttcgcttaacgatgacttctactac
caagtccatgcctcaatccgtgcaggccatcgccagaacccaagccaacccctgcataac
tttgcgcagacctacctttaccaaactggcagtcgccactccggttcgcgacggcatgcg
cgtgcggccgagaatcatgtccagcgtatggagcagcaggttcagcgcgccgtcgaagcc
gccaagaataagccgaagaatccccagctagttattgccgggagcctgggcaagatctct
tacagcaatgccaagacccccaagccgcttcttaatatcaagcggcaagagggtactggc
gacgcccacaggcatgccggttccaagaagccccacggtacccttgataggaagtccgtc
cttcggaacattgagaaggtatattccacgcttatgaagctcgaagaccatgctcgccat
atgccgcctcccgacccgtctctgcaggctcaacacgaacaatgggtaaccactaccaag
gctctcaatgccgagctttgggataatctcaaggtccacgaacctattggcgcaacaacc
ctgcatcctttcatcgcttttttgtctttcaataagggaaagaaggcaattcctagggta
ttccgccacctgactttcgagcagcgagctaccatcctcaccatgatcatcttccacctt
gatcagctagatgttgtgaagggagcacaggtcaacactggagacaccgatctgaatgca
gctctccgcgaaaagattgagctcttctcagtcgtcgtcatgccaagcattttccagttc
ttcaacgaaaccaatttggacattgtcgatggtgctcttgatcttataaacgacaaactt
agtgttgaccttattgcgaagacgaggatcggcacctcgatgctgacgttgattctaagc
cgtgcagagcttcttaaacaggcaggtggcggaacgcctgagcagtggagcaagtgggaa
tctacattcaacaccttcttcaacatcatcgaacctactctgccccatatcttccctgga
agcatcaattccggcgaagatatctacgtttggcagctcctagccgctattggcgtgagc
tcctctcctgagcagcagcagcgtctggttcttgctgtcaaggatcgtgtcatgggcaca
gtcaaccacgctaagactcttccgcaagccatcggtgcccagcggctctcgaacgtcaat
ttattcatgcaatctattggtctcgacgtggaactgcttggttga
DBGET
integrated database retrieval system
