Scedosporium apiospermum: SAPIO_CDS8280
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Entry
SAPIO_CDS8280 CDS
T06367
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03013
Nucleocytoplasmic transport
sapo03015
mRNA surveillance pathway
sapo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SAPIO_CDS8280
09122 Translation
03013 Nucleocytoplasmic transport
SAPIO_CDS8280
03015 mRNA surveillance pathway
SAPIO_CDS8280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS8280
03041 Spliceosome [BR:
sapo03041
]
SAPIO_CDS8280
03009 Ribosome biogenesis [BR:
sapo03009
]
SAPIO_CDS8280
03012 Translation factors [BR:
sapo03012
]
SAPIO_CDS8280
Enzymes [BR:
sapo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAPIO_CDS8280
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SAPIO_CDS8280
mRNA cycle factors
Stress granule specific factors
SAPIO_CDS8280
Spliceosome [BR:
sapo03041
]
Complex C
Other components
EJC/TREX
SAPIO_CDS8280
Ribosome biogenesis [BR:
sapo03009
]
Eukaryotic type
90S particles
Helicases
SAPIO_CDS8280
Translation factors [BR:
sapo03012
]
Eukaryotic type
Initiation factors
eIF-4
SAPIO_CDS8280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
AAA_22
TniB
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
27727352
NCBI-ProteinID:
XP_016640212
UniProt:
A0A084FZA1
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAEGAGSGGIDRKADERMEFTTSKEVTVHPTFEAMSLKENLLRGIYAYGYETPSAVQSRA
IVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMA
LGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDE
ADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTL
EGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMH
GEMPQKERDSIMNDFRRGDSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRS
GRFGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLIA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggagctggttccggcggcattgaccgcaaggctgatgagcgcatggagttc
accacctccaaggaggttaccgtccaccctacctttgaggccatgtccctgaaggagaat
ctcctccgaggtatctatgcgtacggctacgagacgccctctgcagtccagtctcgagca
atcgtccagatttgcaaaggtcgcgatactatcgcccaggcccaatccggtacgggtaaa
acggcgactttctcgatcagtatgcttcaggtcatcgataccgccgttcgcgaaactcag
gctctcgtcctctccccgacacgcgaacttgccacccagatccagtccgtcgtcatggcc
cttggcgactacatgaacgtgcagtgccatgcctgcatcggcggtaccaacgttggcgaa
gatatccggaagctcgactacggccagcacatcgtttctgggacccccggtcgcgtcgcc
gacatgattcgccgccgtcatcttcgtacgcgccacatcaagatgctcgtccttgacgag
gcagacgagctccttaaccgtggcttccgcgaacagatctacgacgtctaccgctatctc
cctcccgccactcaggtcgtggtagtcagcgccacacttccttacgatgtgctcgacatg
acgaccaagttcatgacggatcccgttcgtatcctggtcaagcgtgacgagttgaccctt
gagggcttgaagcaatatttcatcgccgtcgagaaggaggactggaagtttgataccctt
tgcgatctctacgatacccttaccatcacgcaggccgtcatcttctgcaacacgcgccgc
aaggtcgattggctgacggagaagatgcgcgaagccaacttcaccgttagcagcatgcac
ggagagatgcctcaaaaggaacgtgacagtattatgaacgatttcagacgcggagacagt
agggtgctgatttcgaccgacgtttgggcgcgtggtatcgatgtccagcaggtcagtttg
gttatcaactatgacttgccgagcaatcgagagaactacatccatcgtattggtcgtagc
ggtcggttcggtcgcaagggtgttgctatcaactttgttactaccgaagatgttaggatc
cttcgcgacattgagttgtactactccacccagatcgatgagatgccaatgaacgtcgca
gacctcatcgcataa
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