Scedosporium apiospermum: SAPIO_CDS8400
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Entry
SAPIO_CDS8400 CDS
T06367
Name
(RefSeq) ATP-dependent RNA helicase dbp-4
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
sapo
Scedosporium apiospermum
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sapo03009
]
SAPIO_CDS8400
Enzymes [BR:
sapo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAPIO_CDS8400
Ribosome biogenesis [BR:
sapo03009
]
Eukaryotic type
90S particles
Helicases
SAPIO_CDS8400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
27727472
NCBI-ProteinID:
XP_016640303
UniProt:
A0A084FZJ2
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MPAPSSKSSGKPRQKNNTRTKEKREEKRLKGLADLETLEKAVVEFDPKTSESTKFANLPL
SEPTASGLDASHFQTLTEIQARAIPLALKGLDILGAAKTGSGKTLAFLVPVLEKLHRARW
TEYDGLGALILSPTRELAVQIFEVLRKIGRNHPFSAGLVIGGKSLKEEAVRLARMNILVC
TPGRMLQHLDQTAGFDASNLQILVLDEADRIMDMGFQQAVDALVEHLPKSRQTLMFSATQ
SKKVSDLARLSLKDPEYVSVHEKASTATPASLTQHYIITPLPEKINTLYGFLKSNLKSKM
IVFLSSGKQVRFVYESFRALRPGIPLLHLHGRQKQTARLEITSRFAAAQYSCLFATDVVA
RGVDFPAVDWVVQFDCPEDADTYIHRVGRTARFQSNGRAVLFLDPSEEDGMLKRLEHKKV
PIQKVNVKESKRKSIKNELQQLCFQNPDVKYLAQKSFISYTRSVHLQKDKEVFKFNELDL
DGFAASMGLPGAPQIKFQKGEDIKKIKNASRMNMSSDSESEFDEEGNRKRKRKKGEVRTK
YDKMFERTNQDVLSSHYTKLVGDGEAVENGDDGDEDNFLSVKRVLNDEDLDEVSKDFGSM
PKVLDFGGKEQLIIDSKRREKLLQSKKKLLKYRPVGERLVFDDDGNPRAIYELKNEEDFK
QEGPVEEQRRKFIEDEVVRVQEADLQDKMLAKQRIREKREKRKAREKEERELEKAERAEG
GGGGMVVELGGGDDEDGADPLALLRDLPIAGGQEYSSEDEEEDRRPKKKAKKWFQDDESS
ADEGDAKKRKKKSKKGGKVIEIDREPETLEDLEALATGLLD
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccggccccaagttccaaaagctcgggcaagccccggcagaagaataatacgagaaca
aaagaaaagcgagaagaaaagaggctcaagggcctagcagacctcgaaacactagagaag
gctgtcgtagaatttgacccaaaaacttccgaatccaccaaattcgccaacttacccctt
tccgaacccactgcctccggcctcgatgcctcccacttccagaccctcaccgagatccaa
gcccgcgccatccccctcgccctcaagggcctcgacatcctcggagccgccaagaccggc
agcggcaagaccctcgccttcctcgtgcccgtcctcgaaaagctccacagagcccgatgg
accgaatacgacgggctcggcgccctcatcctctcgccgactcgtgagctcgccgtgcag
atcttcgaggtgctgcggaagattgggcggaaccatcccttctcggccgggctggtcatc
ggaggcaagagcttgaaggaggaggcggtgaggttggcaaggatgaacatcttggtgtgt
acgccggggcgtatgcttcagcacctggaccagacggccggtttcgacgcgagtaaccta
cagattctcgttctcgacgaggccgaccggatcatggacatggggttccagcaggccgtt
gatgccctggtagagcacctgcccaagtctcggcagactctgatgttcagcgcgacgcag
agtaaaaaggtgtcggatctggcgcgactgagcctcaaggaccccgaatacgtctccgtc
cacgaaaaggcatcgacggcgacgcctgcttccctcacgcaacactacatcatcaccccg
ctgcccgaaaagatcaatacgctctacggcttcctaaaatctaacctcaagtctaagatg
attgtcttcctctcgtcgggcaagcaggtccgattcgtctacgaaagtttcagggcgtta
cggcccggtattcccttgctacacctacacggcaggcagaaacagactgcgcgacttgaa
atcacctcgaggttcgcggctgcgcaatatagctgcctattcgcaaccgacgtcgtcgcc
cgcggagtggattttcctgccgtggactgggtcgttcagttcgactgccccgaagacgcc
gacacctacatccaccgcgtagggcggacggcgcgcttccaaagtaacggccgggctgtc
ctcttccttgaccccagcgaagaggacggcatgctcaagcggttagagcacaaaaaggtg
ccgatacaaaaagtcaatgtcaaggagtcgaagcggaagagtatcaagaacgagctgcag
caattgtgtttccaaaatccggatgtcaagtacctcgcgcaaaaatcgttcatcagctat
acccgatcggtgcacttacaaaaggacaaggaggtgttcaagtttaacgagttggacctt
gatgggttcgccgcgagcatgggccttcctggtgcgcctcagatcaagttccaaaaggga
gaggacattaagaagattaagaatgctagccggatgaatatgtctagcgattcggaatca
gagtttgatgaggaaggaaaccggaagcggaagcggaagaagggagaggtccggacgaag
tacgataagatgtttgaacgtacgaatcaggacgttctttcaagtcactacaccaagctt
gtcggggatggagaagctgtggagaacggcgacgacggtgatgaggacaactttttgtcg
gtgaagagggtgctgaatgatgaggatctcgatgaggtatccaaagatttcggatcaatg
cccaaggttcttgactttggcggcaaggaacagctcatcatagactcgaaacgaagagag
aagctattacaatcgaagaagaagctgctcaagtaccgaccagtgggagagaggctcgtc
ttcgatgacgacggcaaccctcgtgcgatttacgagttgaagaacgaagaggatttcaag
caggagggccccgtcgaggagcagaggaggaagtttatcgaagacgaggtcgtacgggta
caggaagctgacctgcaggataagatgctagcgaagcagaggatacgcgagaagagggag
aagaggaaggcgagggaaaaggaggagagggaactggagaaggctgagcgcgcggaaggg
ggaggtggtggtatggtggtggagttgggcggcggcgatgacgaggacggggcggatccg
cttgccttgcttcgggatctccccattgcggggggacaggagtacagcagcgaagatgag
gaagaggataggcgtccgaagaagaaggctaagaagtggttccaggatgacgagtccagc
gcggatgagggcgatgcgaagaagcgcaagaagaagtcgaagaagggaggcaaggtcatt
gagattgaccgtgagccggagactctggaggatcttgaggctctggctactgggctgctg
gattaa
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