Scedosporium apiospermum: SAPIO_CDS8964
Help
Entry
SAPIO_CDS8964 CDS
T06367
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03008
Ribosome biogenesis in eukaryotes
sapo03013
Nucleocytoplasmic transport
sapo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SAPIO_CDS8964
03015 mRNA surveillance pathway
SAPIO_CDS8964
03008 Ribosome biogenesis in eukaryotes
SAPIO_CDS8964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS8964
03009 Ribosome biogenesis [BR:
sapo03009
]
SAPIO_CDS8964
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SAPIO_CDS8964
mRNA cycle factors
Stress granule specific factors
SAPIO_CDS8964
Ribosome biogenesis [BR:
sapo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
SAPIO_CDS8964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
LRR_9
NTF2
RRM_9
LRR_4
LRR_8
HTH_39
Motif
Other DBs
NCBI-GeneID:
27728036
NCBI-ProteinID:
XP_016639784
UniProt:
A0A084FY23
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MGPPRGPRGGSAARPSRNVAGARTTDRGGIQKRRAAGPRTDMDGDLDMDGEGRRAKRPAV
GDAKTSRPTRAGRGGRGSAAAPPRMPSKQAQIIARHLNGGGPLASRIANVTTRSQRTPPT
LVWLRVKGLKESKAATNPGGGVKDLLHFLERKATSLANRTSNRPVAIKQHREQGEFILVA
ATKEDSEELLKVNTFTFAGAALSVTIDEQQGPKEAETSADAKLLRDHLQSILSNRYAGAA
KLLKLDSLSSDPAIVQAGLLASSERAEKMFKALMRVCDDLFKTRKEKSEAIESISVANNS
IDNVNQVAVLGDTFPDLLNLDLSGNKIPNIDGLLALKGRFKRLRALYVANNPIETNQPDY
KTTMLEWFPSLQDLNGIQVRTPEQAAAAQAALLPKPFPQGGPDFRDANNIGESFLLDFYT
NYDNHRPELVTKYYDDQSNFSLAVDTESARDPNQPPPLPWAAYLKFSRNLTKITHPPARI
QRLFKGAAVISELWKTLPATKHPDLKQEVSKYIMDCHPLPGLADPTGQVKRGVDGLIITI
HGEFDEFDQKSGSTGKRSFSRTFILGPGIPGKNPIRVVSDMFSLRAYNPLPNIFAAPAPS
PATAEAAVTAEQQQQRAAMVAELCKQSGMTPQYAELCLSDPSVNWDFQKAVAIFNERKTN
LPPDAFATRSS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctccgcgaggtcctcgtggtggctctgccgcccgcccctcccgaaacgtcgcc
ggcgctcgcacgaccgatcgtggtggaatccagaagcgacgagctgcaggcccccgcacc
gatatggatggggatctcgatatggatggcgaaggccgacgcgcgaagagaccagcggtt
ggagacgcaaagacttctcgacctacccgagccggccgcggcggccgcggttcagctgca
gcacctcccaggatgcccagcaagcaggcccagatcatcgctcgccatctcaacggcggt
ggtccactagcatctcgcatcgccaacgttaccacccgatctcagaggactcctcccaca
ctcgtgtggttgcgggtgaagggcttgaaggaaagcaaggctgcgacgaaccctggcgga
ggagtcaaggacctactacacttcctcgaaaggaaggccacatccctagcgaaccgaaca
tccaaccgaccggtagctattaaacagcatcgcgaacaaggtgaattcattctagttgcc
gctaccaaggaagactcggaggaactcctcaaggtcaacactttcactttcgcaggagcc
gccttatcggtgacaatcgatgagcagcaaggtccaaaggaggcagagacgtctgcggac
gcgaaattgcttcgtgatcacctgcagtccatactcagcaaccgctatgccggtgctgcc
aagcttctcaagcttgactctttgagctcagaccccgccatcgtgcaggccggtctgctc
gccagctctgagcgagctgagaagatgttcaaggctctcatgagagtctgcgatgacttg
ttcaaaacccgaaaggaaaagagcgaggccatcgagagcatcagcgttgccaacaacagc
attgacaacgtaaaccaagtcgccgttctcggcgatacattccctgatctcctaaaccta
gacctcagtgggaataaaatccccaacatcgacggtctacttgccttgaagggaaggttc
aaacgccttcgagcgctctacgtcgccaacaacccgatcgagaccaaccagccggactac
aaaaccaccatgcttgagtggttccccagcctccaggaccttaacggtatccaagtccgc
acgcctgagcaagccgccgcggcacaagcagccctgttgccgaagcccttccctcaaggc
ggacccgatttccgcgacgcaaacaacattggtgagagtttcctactggacttctacacc
aactacgacaaccaccgtcccgagcttgtcaccaagtactacgatgaccagagcaatttc
tcgctcgctgtcgacactgagtctgcccgcgatcccaaccagcctccacccttgccgtgg
gcagcctacctcaagttctcacgaaatctcaccaagatcacacacccacccgctcgtatc
caacgacttttcaaaggggccgctgtcatctcagagctttggaagacccttcccgctacc
aagcaccccgatctgaagcaggaagtgagcaagtacattatggactgtcacccgcttccc
ggccttgccgacccgactggccaggtcaagcgcggcgtcgatggcctgatcattaccatt
cacggcgagtttgacgaatttgatcagaaatctggatcgaccggtaagcgaagcttttcg
cgcactttcatcctcggacccggcattcccggaaagaaccccatccgcgtcgtaagcgac
atgttctctctcagggcatacaaccccttgccaaacattttcgcggcccccgccccctcc
cccgcgactgccgaggctgccgtcactgccgagcagcaacaacagcgagccgccatggtt
gcggagctctgtaaacaaagtggcatgactccccagtatgcggagctctgcctttctgat
ccttctgtcaactgggacttccagaaggccgtggccatcttcaatgaaagaaagaccaac
ctcccacctgatgcatttgcaacccggagtagctag
DBGET
integrated database retrieval system