Scedosporium apiospermum: SAPIO_CDS9638
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Entry
SAPIO_CDS9638 CDS
T06367
Name
(RefSeq) Exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAPIO_CDS9638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapo03019
]
SAPIO_CDS9638
Messenger RNA biogenesis [BR:
sapo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SAPIO_CDS9638
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
SAPIO_CDS9638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
S1_RRP5
S1
Motif
Other DBs
NCBI-GeneID:
27728710
NCBI-ProteinID:
XP_016639490
UniProt:
A0A084FX79
LinkDB
All DBs
Position
Unknown
AA seq
210 aa
AA seq
DB search
MASDSKVPTTAVPGTPLGLAIHYHAGHGTHIHEGQIVSSLLGRVTVTQAPSKGPAPLKRL
TKITSRTAEELPTISVARHERRREVLPDVGNVVLCRVVRLVPKQAIVSIQQVGSTVLDTE
WQGVIRAQDVRATEKDKVKIYESFKPGDAVRAQVISLGDQANYYLSTASNELGVIMATSE
AGNDMVPVSWKEFKDPVTGVSELRKVAKPD
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggacagcaaagtccccaccaccgccgtccccggcacgcccctcggcctcgca
atccactaccacgcaggccacggcacacacatccacgaaggccaaatcgtgtcctcgctc
ctcggtcgcgtgacggtgacgcaagcgcccagcaaaggcccggcgcccctcaagcggcta
accaagataacgtcgcggacggcggaggagctgccgacgatttcggtggcgcggcacgag
aggcggcgcgaggtgctgccggacgtggggaacgtggtgctctgccgcgtggtgaggctg
gtgcccaagcaggcgatcgtgtcgattcagcaggttgggagcacggtgttggatacggag
tggcagggggttattcgggcgcaggacgttagggctacggagaaggataaggttaagatt
tatgagtcgtttaagcctggtgatgcggttagggcgcaggtgatatcgcttggtgaccaa
gcaaactactacctatcaacggcatccaacgagctaggtgtcatcatggccacgagcgaa
gccggcaacgacatggtgcctgtgagttggaaggagtttaaggatcccgttaccggcgtc
agcgagttgaggaaggttgcgaagccggactag
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