KEGG   Scedosporium apiospermum: SAPIO_CDS9638
Entry
SAPIO_CDS9638     CDS       T06367                                 
Name
(RefSeq) Exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
sapo  Scedosporium apiospermum
Pathway
sapo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sapo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAPIO_CDS9638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sapo03019]
    SAPIO_CDS9638
Messenger RNA biogenesis [BR:sapo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SAPIO_CDS9638
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     SAPIO_CDS9638
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 S1_RRP5 S1
Other DBs
NCBI-GeneID: 27728710
NCBI-ProteinID: XP_016639490
UniProt: A0A084FX79
LinkDB
Position
Unknown
AA seq 210 aa
MASDSKVPTTAVPGTPLGLAIHYHAGHGTHIHEGQIVSSLLGRVTVTQAPSKGPAPLKRL
TKITSRTAEELPTISVARHERRREVLPDVGNVVLCRVVRLVPKQAIVSIQQVGSTVLDTE
WQGVIRAQDVRATEKDKVKIYESFKPGDAVRAQVISLGDQANYYLSTASNELGVIMATSE
AGNDMVPVSWKEFKDPVTGVSELRKVAKPD
NT seq 633 nt   +upstreamnt  +downstreamnt
atggcctcggacagcaaagtccccaccaccgccgtccccggcacgcccctcggcctcgca
atccactaccacgcaggccacggcacacacatccacgaaggccaaatcgtgtcctcgctc
ctcggtcgcgtgacggtgacgcaagcgcccagcaaaggcccggcgcccctcaagcggcta
accaagataacgtcgcggacggcggaggagctgccgacgatttcggtggcgcggcacgag
aggcggcgcgaggtgctgccggacgtggggaacgtggtgctctgccgcgtggtgaggctg
gtgcccaagcaggcgatcgtgtcgattcagcaggttgggagcacggtgttggatacggag
tggcagggggttattcgggcgcaggacgttagggctacggagaaggataaggttaagatt
tatgagtcgtttaagcctggtgatgcggttagggcgcaggtgatatcgcttggtgaccaa
gcaaactactacctatcaacggcatccaacgagctaggtgtcatcatggccacgagcgaa
gccggcaacgacatggtgcctgtgagttggaaggagtttaaggatcccgttaccggcgtc
agcgagttgaggaaggttgcgaagccggactag

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