Scrofimicrobium appendicitidis: SAC06_00940
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Entry
SAC06_00940 CDS
T10714
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sapp Scrofimicrobium appendicitidis
Pathway
sapp03030
DNA replication
sapp03430
Mismatch repair
sapp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sapp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAC06_00940
03430 Mismatch repair
SAC06_00940
03440 Homologous recombination
SAC06_00940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sapp03032
]
SAC06_00940
03400 DNA repair and recombination proteins [BR:
sapp03400
]
SAC06_00940
Enzymes [BR:
sapp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAC06_00940
DNA replication proteins [BR:
sapp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAC06_00940
DNA repair and recombination proteins [BR:
sapp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAC06_00940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_14
AAA_30
Rad17
AAA_16
Mg_chelatase
DnaX_C
AAA_19
AAA_28
AAA_2
ABC_tran
nSTAND3
AAA_18
ORC-CDC6-like
TsaE
Motif
Other DBs
NCBI-ProteinID:
XBW08156
UniProt:
A0AAU7V6S3
LinkDB
All DBs
Position
194382..196343
Genome browser
AA seq
653 aa
AA seq
DB search
MAVALYRRYRPDNFDDVVGQDHVTELLKNSLDSGRTSHAYLFSGPRGCGKTTSARILARC
LNCAEGPTSTPCGVCESCVELAAGGPGSLDVVEIDAASHNGVDDARELRERASFAPTRDR
YKIFILDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTEPEKVIGTIRSRTHHYPFRLVG
PTVLLPYLQSLCEREGITVEDGVLELVIRAGGGSVRDSLSVLDQLIAGCGGQSVSYAQAT
GLLGYTDTSLLESMVAALGQGDGARAFQIVENAVDSGVDAIQFTKDLLQLLRDVLICALV
PSQAKEVLPHVPQDRLTRMLEQAQAWGTRALSRRADQIDEALRNMSGTASARLQLELLLG
RMLAEDPSAEHEAAPAPAPAPARTSAPAPVERVDPASVAPVQHKTPAPASERPQGNDRRQ
APPAATRPAAPPTPSQSEPRRPAAASTGSSNKTLAEQWAQVGTIVGQVSRVFEVVVKGTT
PVELDGATLRIAPSASVRNRLLSGGAELTAISAAVKQVFGPAVEVEVGEGKRATPSTSPT
STPAPTSAPSRPDSPSRPTPPVAVEPEPGLAVAPDPTPGSTPQSAPEPTPQPAPRPAPEL
EREPEPPAPPAYDPRDDEVSLHDPTVETAPNRGVPAILDVLGGTLIEEIEEER
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
gtggctgttgcgctgtatcgtcgatatcgtcccgacaactttgatgacgtggtggggcaa
gatcacgtcaccgagctgctgaagaactctctcgacagtggcagaacctcacatgcttac
cttttttccggcccccgcggctgcggaaaaaccacgtcggcccgaatcctggctcgctgt
ctgaactgcgccgagggccccacctccaccccgtgcggagtgtgcgagtcctgcgttgag
ctggccgctggtggccccggctccctggatgtggtggaaattgatgccgcctcgcacaac
ggcgtggatgatgcccgggagttgcgggagcgggcgtcatttgccccgacccgggatcgg
tacaagatcttcattttggacgaggcgcacatggtcacctcggccgggttcaacgcgctg
ctgaaaatcgtggaagagccgcccgagcacatcaagttcatcttcgccacgaccgagccg
gagaaagttatcggcacgatccggtcccgcacccaccactacccattccggctagtgggc
ccaacggttctgctgccctacctccagtcactgtgtgaacgcgagggcatcacggtggaa
gacggagtgttggagctggtgattcgggccggcggcggatcggtccgagactccctctct
gtgctcgaccagctgatcgctggttgtggcggccagtccgtgtcctacgcgcaggcgacc
gggctactgggttacaccgacacctccctgctggagtcgatggtggctgctttggggcag
ggcgatggggcgcgggcgttccagattgtggagaacgccgtcgattccggggtggacgcc
atccagttcaccaaggatctgctgcagttgctgcgcgacgtcctcatctgcgccctggtg
cccagccaggccaaagaggtgctgccgcacgtgccgcaggatcgcctcactcggatgctt
gagcaggctcaggcctggggcacccgcgcgctgtcgcggcgggccgaccagattgatgaa
gctctgcgaaacatgagcggaactgccagcgcgcgcctgcagctagagttgctgctggga
cggatgctggccgaagatccttccgctgagcacgaggcggccccggctcccgcgcccgct
ccggctcgaacatcagcgccggccccggttgagcgagttgaccccgcctcggttgcgccc
gtccagcacaagactccggcccccgcctccgagcggccccaggggaacgatcgccggcag
gcaccccccgccgccactcggcccgcggctccgcccaccccctcgcagtctgaacctcgg
cgtccagccgcagcttccaccggttcgtcgaacaaaacgttggccgaacagtgggcgcag
gttgggaccattgtcggccaggtttcccgcgtgtttgaagtggtggtcaagggcacgact
ccggtcgaactggacggtgccaccctgcgaatcgctcccagtgcctccgtccgaaaccgg
ctcctgtcgggaggggccgagctgactgccatcagcgctgccgtcaagcaggtgtttggc
ccggccgtggaagttgaagtgggcgagggtaagcgcgccacaccgtccacttcccccacc
tcgaccccggctccaacgtccgccccgagccgccctgattctcctagtcggccgacccca
ccggtagcggttgagccggagcccgggttggccgttgcgccggatccgacccctgggtcg
acccctcaatcggccccggagcctacccctcaaccggcccctcggccggcccccgagctg
gagcgcgagccggagccaccggctcccccggcctacgacccgcgagacgacgaagttagc
ctgcacgaccccaccgtggagaccgctcccaaccggggtgtgcccgcaatcttggatgtg
cttggcggcacgctgattgaagaaatagaagaggagcggtaa
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