Scrofimicrobium appendicitidis: SAC06_01560
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Entry
SAC06_01560 CDS
T10714
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sapp Scrofimicrobium appendicitidis
Pathway
sapp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAC06_01560 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapp03019
]
SAC06_01560 (groL)
03110 Chaperones and folding catalysts [BR:
sapp03110
]
SAC06_01560 (groL)
03029 Mitochondrial biogenesis [BR:
sapp03029
]
SAC06_01560 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sapp04147
]
SAC06_01560 (groL)
Enzymes [BR:
sapp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SAC06_01560 (groL)
Messenger RNA biogenesis [BR:
sapp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAC06_01560 (groL)
Chaperones and folding catalysts [BR:
sapp03110
]
Heat shock proteins
HSP60 / Chaperonin
SAC06_01560 (groL)
Mitochondrial biogenesis [BR:
sapp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SAC06_01560 (groL)
Exosome [BR:
sapp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAC06_01560 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SAC06_01560 (groL)
Exosomal proteins of breast cancer cells
SAC06_01560 (groL)
Exosomal proteins of colorectal cancer cells
SAC06_01560 (groL)
Exosomal proteins of bladder cancer cells
SAC06_01560 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AEP1
Motif
Other DBs
NCBI-ProteinID:
XBW08272
UniProt:
A0AAU7V899
LinkDB
All DBs
Position
320028..321653
Genome browser
AA seq
541 aa
AA seq
DB search
MSKFISYDEEARRGMENGLNKLADTVKVTLGPRGRNVVLDKKWGAPTITKDGVSVAKEID
LEDPLERIGAELVKEVAKRTDDVAGDGTTTATVLAQALVHEGLRNVAAGSNPIELKRGID
KAVDAIVAQLHKIAQPIETSDQIASTASISANDPEIGKLIAQAFETVGPEGVITVEETNS
FDTTLETTEGMRFDKGYLSAYFVTDAERQEAVLEDAYVLLVESKISSMKDLLPVLEKVMQ
TGKPLLIIAEDIEGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAMLQDMAILTGGQVIS
ETVGLTLEGADLDTLGTARKVVVTKDETTIVDGGGEKEALDARVKQIRAEIEATDSDYDR
EKLQERLAKLSGGVAIIKSGAATEVELKERKHRIEDAVRNARAASEEGIVAGGGVALIEA
AKGVLGDLDVAGDEKIGVAIVRQAVESPIKQIAENAGIDGGVVVDRVSRMESGHGLNAAT
GEYGDLLTEGIADPVKVTRSALQNAASIAGMFLTTEAVVGDKPEPPAPAAAGGMDDMGGM
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtttatttcgtacgacgaggaagcccgtcgggggatggaaaacggcctgaac
aagctggccgacaccgtcaaggtcacgcttggcccccgcggtcgcaacgtggtgctggac
aagaagtggggcgcccccacgatcaccaaggacggcgtttccgtcgccaaggaaatcgac
ctggaagatccgctggagcggatcggcgccgaactggtcaaggaagttgccaagcgcacc
gatgatgtcgccggtgacggcaccaccaccgccaccgtgctggcccaggccctggtccac
gaaggattgcgcaacgtggctgccggctcgaacccgatcgaactgaagcgcggcatcgac
aaggccgtggacgccattgtcgcccagctgcacaagattgctcagccgatcgagacctcc
gaccagatcgcctccaccgcctccatctcggccaacgacccggagatcggcaagctgatc
gcccaggcgtttgagaccgtcggccccgagggcgtcattaccgtggaagagaccaactct
ttcgacaccaccctggaaaccaccgagggtatgcgcttcgacaagggctacctgtccgcc
tacttcgtcaccgacgctgagcgccaggaagccgtgctggaggacgcctacgtcctgctg
gtcgaatcgaagatttcctccatgaaggatctgctcccggtgctggagaaggtcatgcag
accggcaagccgctgctgatcatcgccgaggacatcgagggcgaagccctggccaccctg
gtggtcaacaagatccgcggcatcttcaagtcggtcgccgtcaaggctccgggctttggc
gatcgccgcaaggccatgctgcaggatatggccatcctgaccggcggccaggttatctcc
gagaccgtgggcctgaccctggagggcgccgacctcgacaccctgggcaccgcccgcaag
gtcgttgtcaccaaggatgagaccaccatcgtcgatggcggcggcgagaaggaagcgctg
gacgcccgcgtcaagcagatccgcgccgaaatcgaagcgaccgactccgactacgaccgc
gagaagctgcaggagcgcttggctaagctctccggtggcgtcgccatcatcaagtccggg
gccgccaccgaggtggagctgaaggaacgcaagcaccggattgaggacgcggttcgcaac
gcgcgggcagcctccgaagagggcatcgtcgccggtggcggcgtggccctgatcgaggcg
gccaagggtgtcctgggcgacctggacgtggccggtgacgagaagatcggcgtggccatt
gtgcgccaggccgtcgagtccccgatcaagcagattgccgagaacgctggcatcgacggt
ggcgtggtcgtggaccgcgtctcccggatggagtcgggccacggcctgaatgccgccacc
ggtgagtacggcgacctgctgaccgaaggcatcgccgacccggtcaaggtgacccgctcc
gccctgcagaacgcggcctccattgccggcatgttcctcaccaccgaagctgtggttggg
gacaagcccgaaccgccggccccggccgctgcgggtggcatggacgacatgggcggcatg
tactaa
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