Scrofimicrobium appendicitidis: SAC06_02585
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Entry
SAC06_02585 CDS
T10714
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sapp Scrofimicrobium appendicitidis
Pathway
sapp00521
Streptomycin biosynthesis
sapp00523
Polyketide sugar unit biosynthesis
sapp00525
Acarbose and validamycin biosynthesis
sapp00541
Biosynthesis of various nucleotide sugars
sapp01100
Metabolic pathways
sapp01110
Biosynthesis of secondary metabolites
sapp01250
Biosynthesis of nucleotide sugars
Module
sapp_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sapp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAC06_02585 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SAC06_02585 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SAC06_02585 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SAC06_02585 (rfbB)
00525 Acarbose and validamycin biosynthesis
SAC06_02585 (rfbB)
Enzymes [BR:
sapp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SAC06_02585 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
Semialdhyde_dh
NmrA
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
XBW08462
UniProt:
A0AAU7V9F7
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Position
543863..544861
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AA seq
332 aa
AA seq
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MRIVVTGGAGFIGVNFVHMLLQEHPEVEVEVLDAFTYAGNRASLADGQTDRLTVTEGSIT
DAELVDRVVARADAVVHFAAESHNDNSLLGPAPFIQTNLVGTFTLLEAVRKYDVRFHHVS
TDEVYGDLELDDPAKFTPETPYNPSSPYSASKAGSDMLVRAWVRSFGVRATISNCSNNYG
PYQHIEKFIPRMITNRLVGIRPRLYGEGKNVRDWIHVLDHNEAVWLILNEGRIGETYLIG
ADGEESNRDVVAILNELMGYPADDYDPVADRAGHDLRYAIDATKLREELGWQPRFTSFRE
GLADTIRWYEDHESWWRPQKEAVEAKYAAQGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgtggtcaccggcggtgctggttttatcggcgtcaacttcgtgcacatgctg
ctgcaggagcacccggaagtggaagtggaagtgctggacgctttcacctacgcggggaat
cgggcgtcactggcagacggacaaaccgatcgcctgacggtgaccgagggatcgatcacg
gacgcggaactggtggaccgggtggtggcccgcgccgacgcggtggtgcactttgccgcc
gagtcgcataacgacaactcgctgctggggcccgccccgtttatccagaccaacctggtc
ggcacctttaccctgctggaagcggtccgcaagtacgacgtccgcttccaccacgtctct
accgacgaagtttacggtgacctggagttggacgatccggccaagttcaccccggagacc
ccgtacaatccgtcctcaccctactcggcctcgaaggccggctcggacatgctggtccgg
gcgtgggtgcgcagcttcggggtgcgcgcgaccatctctaactgctccaacaactacggg
ccctaccagcacatcgagaagttcattccccggatgatcaccaaccggctggtggggatt
cgcccccggctttacggcgagggcaaaaatgttcgggactggatccacgtcctggaccat
aacgaggcggtgtggctgatcctgaacgagggccggatcggggaaacctacctgatcggg
gcggatggggaagagtccaaccgcgacgtggtggcgatcctgaacgagctgatgggctat
cctgccgacgactacgatccggtggcggaccgggccggccacgacctgcgctacgcgatc
gacgcgaccaagctccgggaggagttgggttggcagccccggttcaccagtttccgggag
ggcctggccgacacgatccgctggtacgaggaccacgaatcctggtggcgcccgcagaag
gaagccgtggaggccaagtacgccgcccaggggcagtag
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