KEGG   Scrofimicrobium appendicitidis: SAC06_02585
Entry
SAC06_02585       CDS       T10714                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sapp  Scrofimicrobium appendicitidis
Pathway
sapp00521  Streptomycin biosynthesis
sapp00523  Polyketide sugar unit biosynthesis
sapp00525  Acarbose and validamycin biosynthesis
sapp00541  Biosynthesis of various nucleotide sugars
sapp01100  Metabolic pathways
sapp01110  Biosynthesis of secondary metabolites
sapp01250  Biosynthesis of nucleotide sugars
Module
sapp_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:sapp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    SAC06_02585 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SAC06_02585 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    SAC06_02585 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SAC06_02585 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    SAC06_02585 (rfbB)
Enzymes [BR:sapp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     SAC06_02585 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD NAD_binding_4 RmlD_sub_bind Polysacc_synt_2 NAD_binding_10 Semialdhyde_dh NmrA Ldh_1_N
Other DBs
NCBI-ProteinID: XBW08462
UniProt: A0AAU7V9F7
LinkDB
Position
543863..544861
AA seq 332 aa
MRIVVTGGAGFIGVNFVHMLLQEHPEVEVEVLDAFTYAGNRASLADGQTDRLTVTEGSIT
DAELVDRVVARADAVVHFAAESHNDNSLLGPAPFIQTNLVGTFTLLEAVRKYDVRFHHVS
TDEVYGDLELDDPAKFTPETPYNPSSPYSASKAGSDMLVRAWVRSFGVRATISNCSNNYG
PYQHIEKFIPRMITNRLVGIRPRLYGEGKNVRDWIHVLDHNEAVWLILNEGRIGETYLIG
ADGEESNRDVVAILNELMGYPADDYDPVADRAGHDLRYAIDATKLREELGWQPRFTSFRE
GLADTIRWYEDHESWWRPQKEAVEAKYAAQGQ
NT seq 999 nt   +upstreamnt  +downstreamnt
atgcgaatcgtggtcaccggcggtgctggttttatcggcgtcaacttcgtgcacatgctg
ctgcaggagcacccggaagtggaagtggaagtgctggacgctttcacctacgcggggaat
cgggcgtcactggcagacggacaaaccgatcgcctgacggtgaccgagggatcgatcacg
gacgcggaactggtggaccgggtggtggcccgcgccgacgcggtggtgcactttgccgcc
gagtcgcataacgacaactcgctgctggggcccgccccgtttatccagaccaacctggtc
ggcacctttaccctgctggaagcggtccgcaagtacgacgtccgcttccaccacgtctct
accgacgaagtttacggtgacctggagttggacgatccggccaagttcaccccggagacc
ccgtacaatccgtcctcaccctactcggcctcgaaggccggctcggacatgctggtccgg
gcgtgggtgcgcagcttcggggtgcgcgcgaccatctctaactgctccaacaactacggg
ccctaccagcacatcgagaagttcattccccggatgatcaccaaccggctggtggggatt
cgcccccggctttacggcgagggcaaaaatgttcgggactggatccacgtcctggaccat
aacgaggcggtgtggctgatcctgaacgagggccggatcggggaaacctacctgatcggg
gcggatggggaagagtccaaccgcgacgtggtggcgatcctgaacgagctgatgggctat
cctgccgacgactacgatccggtggcggaccgggccggccacgacctgcgctacgcgatc
gacgcgaccaagctccgggaggagttgggttggcagccccggttcaccagtttccgggag
ggcctggccgacacgatccgctggtacgaggaccacgaatcctggtggcgcccgcagaag
gaagccgtggaggccaagtacgccgcccaggggcagtag

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