Scrofimicrobium appendicitidis: SAC06_03055
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Entry
SAC06_03055 CDS
T10714
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sapp Scrofimicrobium appendicitidis
Pathway
sapp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAC06_03055 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sapp03021
]
SAC06_03055 (rho)
03019 Messenger RNA biogenesis [BR:
sapp03019
]
SAC06_03055 (rho)
Transcription machinery [BR:
sapp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SAC06_03055 (rho)
Messenger RNA biogenesis [BR:
sapp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAC06_03055 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
SAP
Spore_III_AA
AAA_22
EcoRI
Motif
Other DBs
NCBI-ProteinID:
XBW08554
UniProt:
A0AAU7V8G4
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All DBs
Position
656076..657812
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AA seq
578 aa
AA seq
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MDQKNGVPSEADLNKLKLPELRALAGQLGLRGTSRMRKPELVAAIVGKPAPAADLLDSLP
APAPQTASAEASSGSSRPRRRVSTDSAVEPKSAAHALLDAPAKKEEISSRPARRPEKKSD
TVDVRAAVAEDLQAVRARKQGDDSAPAEDVSRKLDSIDLPEGGEPNRSRGRRDRGRRRGR
DRQDRPERTEQQSNGNNNSAPAEDLVPIAGILDVQANHAFVRTSGYLPGENDVYVTLGNV
RRWGLRAGDAVMGAVRPAREGERRQQKYNALVRLDSVNGMSVEQATSRREFGKLTPEYPR
EQLRLETTPKALTPRVIDLVSPIGKGQRGLIVAPPKAGKTMIIQQIAKAIEVNNPDVHLM
VVLVDERPEEVTDMRSIVKGEVIASTFDRPAHDHTMVAELAIERAKRLVEMGADVVVLLD
SITRLSRAYNLAAPASGRILSGGVDAAALYPPKKFFGAARNLREGGSLTIIASALVETGS
KMDEVIFEEFKGTGNMELRLSRQLADRRIFPAIDINSSGTRREELLLKPEELQIMWKLRR
VLGSLDQQSALELVLGKLKETQTNAEFLMLVQKTTPAE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaaaaacggcgtgccgtcagaggctgacctgaacaagctcaaactccctgag
ttgcgcgccctggcgggccagctgggcctgcgcggcacatcgcggatgcgtaagcccgaa
ctggtcgctgccattgttggcaagccggcccccgccgcggacctgctggattcgctgcca
gccccggccccccagacagcttccgccgaagccagctccggctcctctcgcccgcgtcgc
cgggtgagcaccgactccgccgttgagcccaagtcggccgcccacgccctcctcgacgcc
cccgcgaagaaggaagaaatttcctctcgccccgcgcgccggcccgaaaagaagtccgac
acggtggacgtgcgggctgcggtggccgaagacctgcaggcggtccgcgcccgcaaacag
ggggacgattccgcccccgccgaggacgtgagccgcaagctcgactcaatcgacctaccc
gaaggtggggaaccgaaccggtcccgtggccgccgtgaccgcggtcggcgccggggacgg
gaccgccaggaccggcccgaacggaccgaacagcagtccaacggcaacaacaacagtgcc
cccgcggaagacctggtgccgattgccggcatcctggacgtgcaggcgaaccacgcgttt
gttcgcacctccggctacctgccgggcgaaaacgacgtctacgtcaccctcggtaacgtc
cgtcggtggggcctgcgcgccggcgatgcggtgatgggtgcggtccgaccggcccgcgaa
ggcgagcggcgccagcaaaagtacaacgccctggtccgcctggactcggtcaacgggatg
agcgtcgaacaggccacttcgcggcgcgagttcggtaagctcacccccgagtacccgcgt
gagcagctgcgactggaaacgacccctaaggccctcaccccccgcgtgatcgacctggtg
tcccccatcggcaaggggcagcgcggcctgatcgtcgccccgccgaaggccggcaagacc
atgatcatccagcagatcgccaaggcgattgaggtgaacaaccccgacgtccacctgatg
gtggtgctggtggacgagcggcccgaagaggtcaccgacatgcgttcgatcgtcaagggt
gaggtgatcgcctcgacctttgaccgtcccgcccacgaccacaccatggtggccgagctg
gcgatcgagcgggccaagcgcctggtggaaatgggggccgacgtggtggtcctcctcgac
tcgattacccgcctgtcccgggcctacaacctggctgcccccgcctcgggccgaatcctg
tccggcggcgtcgacgcggcggccctctacccgcccaagaagttcttcggtgcggcccgg
aacctgcgtgagggcggctcgctgaccatcatcgcctccgccctggtggagaccggctcg
aagatggacgaggtgatcttcgaagagttcaagggcaccggcaacatggagctgcgcctc
tcgcgtcagctggctgaccggcggatcttcccggcgatcgacatcaattcctccgggacg
cggcgcgaggagctgctgctcaagcccgaagagctgcagattatgtggaagctgcgccgc
gtgctcggctccctggatcagcagtcggcgctggagctggttctcggcaagctgaaggaa
actcagaccaacgccgagttcctgatgctggtgcagaaaaccaccccggcagagtag
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