Scrofimicrobium appendicitidis: SAC06_03500
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Entry
SAC06_03500 CDS
T10714
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sapp Scrofimicrobium appendicitidis
Pathway
sapp03420
Nucleotide excision repair
sapp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sapp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAC06_03500
03430 Mismatch repair
SAC06_03500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sapp03400
]
SAC06_03500
Enzymes [BR:
sapp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAC06_03500
DNA repair and recombination proteins [BR:
sapp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAC06_03500
MMR (mismatch excision repair)
Other MMR factors
SAC06_03500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
XBW08637
UniProt:
A0AAU7V859
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All DBs
Position
759544..763014
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AA seq
1156 aa
AA seq
DB search
MSRNDELSQLVAQLGVHQPTPEQAEVITYPLRLDREGESVATPLLVVAGAGSGKTETMSL
RAVYLAATQGIPDDAILGLTFTRKAAAELAARLSDRLAQLRLEAGSDLGALEFESSPTAT
TYDSFALDVVREFGPQLGIPTDFSHLGAAASWQLMYSIIEEWPTRISEGRELSTITTAAL
ELRDAIANQAMTLAEARRALERIDQRFNAREHDEEAPKFTQPLAAGRDLNRERLALLPVI
EAFEERKREERRLDFSDQVLLATRIVEHLPTARAELRDRHQVVFLDEFQDTSVAQLRFLS
ALFADHPVTAVGDPNQAIYGWRGASAASLNDFHRYFTQNRRAPRGTLSLSTAWRNSTLIL
DVANRVAQDLARPPAWLESATMREELVFSPTLQPRPEAPTGEVTLRYRQTETESIQDVVE
FLRDTYRQAEKNGLPRPTAAVLCRNRRLMAPVLEACRAAEIPAETGGDDGLLLHPAVLDV
RAALEICHDLGRSSQIMRLLTNLDLGSKDLWALSRLAKQLARRAKPKNSEQPDRREVPLL
IDAVDYLSGPQAQRLELSEAEQISAIGRERIVRLGRQLRAMRRAADWPIVDQVENARRIL
QLDEQAFALGDLAGLTEVLDAFTRAAQDYVDSAVQPTMGGFLSWLSAANQFERGLPLPTV
QPNPEAVQVLTIHGAKGLEWDTVAIVGMQSGHFPGGQPGKLVDQPDGSVKATPPPMPPTV
SGWWQNLGELPYPARRDHEHLPNPDAWAGDEAFTKVFTEFKTCLGEYQLAEDRRLAYVAL
TRAKTRMFLTGAWYHGAKTRRYPSLFYQEAEEVPGVDSRRDDPPTAVQVQEFMQVETEAV
FPIQPGPLRKRVSLSAAKVEEQLALLSGGSGWRPADLLASLPDQELATSMQVLLREHEDR
QALRRLSRSERARREVKLAAAGDRAFSATELARLDLVEDPWVELRRPLPARPMPAAAIGT
AFHQWVESVLRRASARASEEEPGQDLLPLGGADQDLGADAVLDPEQRQVLGELQSQFTGL
EWLGRLRVEGVEVPFDLDLGGLLVRGRVDAVFTDPDDSSSWLVDWKTGRIPDLDRVEAID
RAEIIRYLVQLEVYTAAWQRRHGPEHPVQAALVFVRPDRTEMIKLDQLRAAHRQWAGSPL
SVEEIARRWKRELSSD
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccgtaacgacgagctcagccagttggtggcgcaactcggcgtccatcaacccacg
cccgaacaagccgaagtaattacctacccgctccggctggaccgggagggggaatcggtg
gccacgcccctgctggtggtggccggggccgggtccggcaagaccgaaacaatgtccctg
cgggccgtctacctggcggccacccaggggattccagacgatgccattctcgggttgacc
ttcacccggaaggccgcggccgagttggctgcccggcttagcgaccggctggcgcaactg
cgcctggaagcggggtcggacctcggtgcgctggagttcgaatcttcgcctacggccacc
acctacgattccttcgccctggacgtggttcgagagttcggtccgcagctgggaatcccg
accgacttcagccatttgggggcggcggccagctggcagctgatgtactccatcatcgaa
gagtggcccacgcggatctcggagggccgagagctgagcacaattaccacggcggccctg
gagctgcgcgatgccattgccaaccaggcgatgacgctggcggaggcccgccgcgcgctg
gagcggatcgatcagcggttcaatgcccgcgagcatgatgaggaagcccccaagttcacc
caacccctggccgcaggacgcgacctcaaccgcgaacgcctcgccctgctgccggtgatc
gaagcatttgaagagcgcaaacgcgaggaacggcgcttggatttctcggatcaggtcctg
ctggccacccgaattgtcgagcacctgcccaccgcccgggctgaactgcgagaccggcac
caggtggtcttcctcgacgagtttcaggacacctcggtggcccagctgcggttcctatcg
gccctgtttgccgaccacccggtgacggcggtgggtgaccctaaccaggccatttacggt
tggcggggggcttcggcagcctcactcaacgacttccatcgctacttcacccagaaccgg
cgtgccccgcgcggcacgctgagcctgtccaccgcctggcgcaactccaccctgattctc
gatgtagccaaccgggtggcgcaggatctggcccggccccccgcctggcttgagtcggcc
accatgcgcgaagagctggtcttctcacccactctgcagccgcggcccgaagccccaacc
ggggaggtaacgctccgataccggcagactgaaaccgagtcgatccaggacgtggttgaa
ttcttgcgggacacctaccggcaggcggagaagaacggtttgccgcgaccaaccgcggca
gtcctgtgccgaaaccgtcggctgatggctccggtcctggaggcgtgccgcgcggccgag
attccggccgaaaccggtggtgacgacgggctgctgctgcacccggccgtgctcgacgtt
cgcgctgccctggagatctgccacgacctgggtcggtccagccagatcatgcgcctactc
acgaacctggatttgggctccaaagacctgtgggcactcagccggctggccaaacagttg
gcccggcgggccaaacccaagaactccgagcagccggaccggcgggaggtgccgctgctg
atcgacgcggtggactacctgagtggaccccaggctcagcggttggagctgtccgaagcc
gagcagatctcggcgattggtcgggaacggattgtccgcctgggtcgccaactgcgggcc
atgcgccgcgcagccgactggccgatcgtcgaccaggttgagaacgcccgtcggatcctc
cagttggatgagcaggcgtttgcccttggcgacctggccgggctgaccgaagtgctcgat
gcgtttacgcgggccgcccaggactatgtcgacagtgcagtgcagccaacgatgggaggc
ttcctttcctggttgtcggcggcgaaccagtttgagcggggcctgccgttgcccacggtt
caacccaacccggaggcggtgcaggtgctgaccattcacggcgccaaaggcctggagtgg
gacacggtggcaattgtgggaatgcaaagtgggcacttccccggggggcaacccggcaag
cttgtcgaccagccggatgggtccgtcaaggccaccccaccgcccatgcccccgactgtc
tccggttggtggcagaatctgggagaactgccctatccggcgcggcgagaccacgaacac
ctacccaacccggatgcgtgggccggtgacgaggcgttcaccaaggtctttaccgagttc
aagacgtgtctgggggagtaccagttggcggaggaccggcgcctagcctacgtggccctc
acccgggccaagacccggatgttcctgaccggagcctggtaccacggcgccaaaacccgc
cgatatccgtccctgttctaccaggaagcggaggaagtgcccggggtggatagccggcgg
gacgaccccccgaccgcagttcaggttcaggagttcatgcaggtcgaaacggaagcggtc
ttcccgattcaaccgggtccgctccggaagcgggtctccctctcggctgcgaaggtggag
gagcagttggcgctcctgtccggcggctccggatggcgccccgccgacctgttggcatca
ttgccggaccaagagctggccacctcgatgcaggtgctgctgcgcgaacacgaggaccgg
caggcccttcgtcggttgagccggtccgagcgggcgcggcgcgaagtgaagctggccgct
gccggggaccgggccttctctgcgaccgagctggcccgcttggacctggttgaagatccg
tgggtggaactgcgccggccactgcccgcccggcccatgccggcggcggcgatcggaacc
gcattccaccagtgggtggaaagtgtgctgcggcgcgcttcggctcgcgccagtgaggag
gagcccggccaggacctgctgccgctcggaggggcggatcaggacctcggggcggacgcg
gtgctggatccggaacagcggcaagtattgggggaactacaatcccagttcaccggcttg
gagtggctcggccggttgcgggtggaaggggtggaggttcccttcgatctggaccttggt
ggtctgctggtccgcggccgggtagacgcggtcttcaccgatccggacgattccagcagt
tggctggtggattggaaaaccgggcgaatccccgacctggatcgggtggaggcaatcgac
cgggcggagatcatccgctacctggtgcaacttgaggtctatacggccgcctggcagcgc
cggcacggtccggagcatccggtgcaggcggccctggtcttcgttcggccggaccggacc
gagatgatcaagctggatcagctgcgagccgcccatcggcagtgggcggggagtcccctg
tcagtggaggagattgcccgccggtggaaacgggagttgagttcggactag
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