Scrofimicrobium appendicitidis: SAC06_03930
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Entry
SAC06_03930 CDS
T10714
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sapp Scrofimicrobium appendicitidis
Pathway
sapp00061
Fatty acid biosynthesis
sapp01100
Metabolic pathways
sapp01212
Fatty acid metabolism
sapp02024
Quorum sensing
sapp04146
Peroxisome
Module
sapp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sapp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SAC06_03930
00071 Fatty acid degradation
SAC06_03930
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SAC06_03930
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAC06_03930
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sapp01004
]
SAC06_03930
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sapp04147
]
SAC06_03930
Enzymes [BR:
sapp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SAC06_03930
Lipid biosynthesis proteins [BR:
sapp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SAC06_03930
Exosome [BR:
sapp04147
]
Exosomal proteins
Exosomal proteins of breast milk
SAC06_03930
Exosomal proteins of breast cancer cells
SAC06_03930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DIP2116-like_N
Motif
Other DBs
NCBI-ProteinID:
XBW08715
UniProt:
A0AAU7VBF7
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All DBs
Position
complement(850334..852205)
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AA seq
623 aa
AA seq
DB search
MSNENNPSADDVSEDSPVTEALEWTGPVLERVDEHLSIPALLERRVSANPRSPIIELKSE
MGATWRPIYAGDFWREVQAVAAGLIGMGLEFGDRFAIMSHTRYEWTLLDFAGWTAGLAPV
PIYETSSASQIAYILQDAEVKLVVAESISNANLVRAAAEQAGVSVQVLSLDSQAIATITE
AGRTIPVTEVTARANRLTTDSLATLVYTSGTTGTPKGVVINHGNFTELTVNSYLWMPEVA
SHPKSRLLLFLPLAHILARFLQVYQVCSQGVLGHSPDIKNLLPDLASFRPSYLLVVPRVL
EKIYNSADASTGSGVKNRMFRWAANTAVEYSKALDTEEGPSRALATQHKLASALVLSKII
NLVGGNAEFVISGGAPLSEHLSHFYRGAGLPVLEGYGLTETTGPISVNTPRLNKIGTVGP
PLPPMSVRISDDGEVLVKGSSVFQGYLHNQELTDQVLKDGWFATGDLGSLDRDGYLRITG
RAKEVIVTAGGKNVIPSALEDELRGHPLISQIVVVGDKRPFISALITLDTEMLPLWLKNK
GLPALSAAEAIENIEVRASLDRAIARTNEKVSRAESIRKFEILPTDLTEANGMLTPSLKV
KRSVVLREFADVIDRIYGGPVEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacgaaaataacccttcggcggacgacgtgagtgaggacagtccggtcaccgaa
gccctcgaatggaccggcccggtcctggagcgagtcgacgaacacctgtcgattccagcc
ctgctggaacggcgcgtgtcggctaaccctcgctcgccaatcatcgagttgaagagcgag
atgggagccacctggcgtcccatctacgccggcgacttctggcgcgaggtgcaggcggtg
gcggccggcctgatcggaatggggttggagttcggcgaccggttcgcgatcatgtcgcac
acccggtacgagtggacgctgctcgactttgccggctggaccgcggggcttgctccagtt
ccgatctatgaaacgtcctctgcttcgcagattgcttacattctgcaggatgcggaagtg
aagctggtggtggccgagtccatttctaatgccaacctggtccgcgccgcggccgagcag
gccggagtctcggtccaggtcctgtccctggactcgcaggcgatcgccaccattactgag
gcgggccggaccattccggtcaccgaggtaacggcccgggccaaccggctcaccaccgac
tccctcgccaccttggtgtacacctcgggaacgacggggacaccgaagggcgtggtaatt
aaccacggcaacttcaccgagctgacggtgaattcctacctgtggatgccggaggtggcc
agccaccccaagtcccgcctgctcctgtttttgccgctcgcccacattttggcgcggttc
ctgcaggtctaccaggtgtgcagccagggcgtgctgggccactctcccgacatcaagaac
ctgctgcccgatctggcatcgttccggcccagctacctgctggtggtcccccgggtgctg
gagaaaatctacaactcggctgacgcctcaaccggctccggggtgaagaaccggatgttc
cgctgggccgccaacacggccgtggagtactccaaggccctggacacggaggagggcccc
tcccgggcgctcgccacccagcacaagctggcctccgccctggtgctgtccaagatcatc
aacctggtgggcggcaatgccgagttcgtcatctccggcggcgctcccctgtccgagcac
ctatcccacttctaccgcggggctgggctcccggtgctggaagggtacggcctgaccgaa
accaccggaccaatctcggtgaacactccccgtctgaacaagatcggcaccgtcggtccg
ccgctgccgcccatgtcggtgcggatctcggacgacggcgaagtgctggtcaaggggtct
tcggtgttccagggttacctgcacaaccaggagctgacggaccaggtcctgaaagacggc
tggtttgccaccggtgacctgggttcgcttgatcgggatggctacctgcggatcaccggt
cgggccaaagaggtgatcgtgaccgccgggggcaagaacgtcattccctccgcgctggaa
gacgagctgcgcggccacccgctgatcagccagatcgtggtggttggggacaagcgtccg
ttcatctcggcgctgattaccctggacacggagatgttgccactgtggttgaagaacaag
ggcttgcccgcgctctctgccgccgaggcaattgagaacatcgaggtccgagcttccctg
gatcgggccattgcccggaccaatgagaaggtgtcccgcgccgaatccatccggaagttt
gagattctcccaaccgatctgaccgaagccaacgggatgctgacgccctccctgaaggtg
aagcgttcggtggtgctgcgcgagtttgcagacgtgattgaccggatttacggcggtccc
gtcgaatactag
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