Scrofimicrobium appendicitidis: SAC06_05815
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Entry
SAC06_05815 CDS
T10714
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sapp Scrofimicrobium appendicitidis
Pathway
sapp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sapp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAC06_05815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sapp03019
]
SAC06_05815
03009 Ribosome biogenesis [BR:
sapp03009
]
SAC06_05815
Enzymes [BR:
sapp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAC06_05815
Messenger RNA biogenesis [BR:
sapp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAC06_05815
Ribosome biogenesis [BR:
sapp03009
]
Prokaryotic type
rRNA helicases
SAC06_05815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
XBW07172
UniProt:
A0AAU7V4P2
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All DBs
Position
1252438..1254213
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AA seq
591 aa
AA seq
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MPHASLPVDPEQSEITTTFSDLGLGQQTLSILDRLGFVTPTPIQTAAIPVLSQGRDVVGI
AQTGTGKTAAFGLPLLEAIDPHQREVQALILAPTRELALQTSQALEQFAAGRKIDVVAVY
GGAPYGPQLHALRTGAQVVVGTPGRVIDLIEKKGALNLGAVRYFVLDEADEMLRMGFAED
VEQITGALPDSRLTALFSATMPAAIERVAKQHLQDPVRLEVSTAASTVDTIRQTYAVVPP
RFRFEALTRVLAVRDGGATIVFVKTRQDAEEVSLDLAAQGFRAAGISGDVAQTDRERLVS
RLRSGHLDVLVATDVAARGLDVERIGLVVNYDVPREREAYVHRIGRTGRAGRDGESLTFF
GPRDRFQLRQIERLTGERMEEVHVPSRAEVTQVLAQRKLSSLAELPAGPTSDLLQQALND
QLATGVSLHELALRMLAELTGTTSAKASRPTHISEAVVDQDGYFLSAEFTGQGGKRERRS
EPVSRGKGHPGRQDVDFQHRYRVEVGRKDGVTPGALVGAIAGEGGLTGADVGHINIFPSF
SLVELAEGLSPSQVKRIGRATVRGRRLRISEDSGPTQRKTRFADRSKHKRR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgccccacgcatcacttccggtggatccggaacagtctgaaatcaccaccactttttcc
gatctagggctgggccagcagacgctctcaatcctcgatcgactcgggtttgtcactccg
acgcctattcaaaccgccgctattccggtcctcagccagggccgggacgtggtcggcatc
gcccagactggcaccggcaagaccgctgcattcggtttgccgcttctggaagctattgac
ccgcaccagcgggaagtgcaggcgctgattctggcccccactcgggagctggcgctgcag
acctcgcaggcgctggaacagtttgccgcgggtaggaagatcgacgtagtcgccgtctac
ggcggagcaccctacgggccgcaactacacgctcttcggaccggcgcccaagtagtggtg
ggcacccccggtcgggtaatcgacctgatcgaaaagaagggcgccctcaacctgggtgcg
gttcgctacttcgtcctcgacgaggccgatgagatgctccggatgggttttgcggaggac
gtcgaacagatcaccggagcactgccggattcgcggctgaccgccctgttctccgccacc
atgccggccgcgatcgaacgggtcgccaagcagcacctgcaggatcccgtgcgtctggaa
gtctccacggccgcctccacggtggacacgattcgacagacctacgcggttgttccgcct
cggttccgctttgaggccctcacccgggtcctagccgtgcgcgacggcggcgcgaccatc
gttttcgtcaagacgcgacaggacgccgaagaagtctcgttggacctggccgcacagggg
ttccgcgccgccggcatctccggcgacgtcgcccagaccgatcgggaacgcctcgtctcc
cggcttcgctcagggcatctcgacgtcctggtcgccaccgacgtggccgcccgaggtttg
gacgttgagcggatcggcctcgtggtgaactacgacgtaccccgcgaacgcgaggcctac
gtgcaccggattggtcggaccgggcgcgccgggcgcgacggcgaatccctcaccttcttc
ggtccccgcgatcggttccagctgcgccaaatcgagcgtctcaccggcgaacggatggaa
gaggttcacgtgccttcgcgggccgaggtgacccaggtcctcgcccagcgcaagctcagt
tctttggctgagctgccggcaggccccaccagcgacctgctgcagcaggccctcaacgac
cagttggccaccggggtttccctgcacgagctggccctgcggatgctcgcggaactaacc
gggaccacaagcgccaaggcttctcgcccgacccacatttccgaggcggtagtggatcag
gacggatacttcctttccgccgagttcaccggccagggtggcaagcgcgagcgtcgcagc
gagccggtgagtcgcggcaagggtcaccccggacgccaagacgtcgacttccagcatcgc
taccgggtcgaggtgggccgaaaagacggcgtcaccccgggagccctggtgggggcgatt
gcaggcgaaggcggactgaccggagcggacgtgggacacatcaacatcttcccgtccttc
tcgctggtcgagttggccgaaggcctctcccccagtcaggtgaagcggattggtcgcgca
accgtccgtggtcgccgccttcgcattagcgaagactcgggccccacccaacggaagacc
cggttcgccgaccggtccaagcacaagcgccgttag
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