Scrofimicrobium appendicitidis: SAC06_07045
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Entry
SAC06_07045 CDS
T10714
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sapp Scrofimicrobium appendicitidis
Brite
KEGG Orthology (KO) [BR:
sapp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sapp03016
]
SAC06_07045 (truB)
Enzymes [BR:
sapp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAC06_07045 (truB)
Transfer RNA biogenesis [BR:
sapp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAC06_07045 (truB)
Prokaryotic type
SAC06_07045 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XBW07401
UniProt:
A0AAU7V532
LinkDB
All DBs
Position
complement(1509089..1509973)
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AA seq
294 aa
AA seq
DB search
MSSAGILLVDKPAGLTSHDVVGKVRRLARTRAVGHAGTLDPAATGLLILGVNRGTKLLTY
LTGLDKTYRATIRLGADTTTDDAEGEVLSAPGCPPLAADVLEAALAQFRGRIQQVPASVS
AIKVDGKRAHALVRAGQQVELAARPVTILRLEQLGPARVVDQFLDLDVEVECSSGTYIRS
LARDLGRVLGVGGHLTSLRRTTIGPWTVAEATPLADLPPDPTLLSFDQVCPTLFPLVEIT
PAQAERFRYGQVPELDVTLAEGEVRSIGVPGANVAGLVQVKSGRLKPAFIIQPI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgccggaatcctgctggtggacaagccggccggcctgaccagccacgacgtg
gtggggaaggttcggcggctggcccgcacccgggcggttggtcacgccggaaccctggat
ccggctgcgaccgggctgctgatcctcggggtgaaccggggaaccaaactgctcacctac
ctgaccgggctggacaagacctaccgggccaccatccggctgggcgcggacaccaccacc
gacgatgccgagggggaagttctttcggctccgggctgcccgccgctggcagcggacgtg
ctggaggcggccctagctcagtttcgggggcggattcagcaggtccccgcctccgtcagc
gcgatcaaagtggacggcaagcgggcccacgccctggtccgggccgggcagcaggtcgag
ctggccgctcgcccggtgacgatcctccgcctcgaacaactgggcccggcccgcgtggtc
gaccagttcctggacctggacgtagaagtggagtgctcttccggcacctacattcgttcc
ctggcccgggatctggggcgagtcctgggagtgggcgggcacctgacctccctcaggcgc
acgacaattgggccgtggacggtagccgaggccaccccgctggcggacctgccccccgac
ccgaccctgcttagcttcgatcaggtttgtccgaccctgtttccgctggtagagatcacc
cccgcccaggcggagcggttccgctacggccaggttcccgagctggacgtgacgctggcc
gagggggaagtgcggagtatcggggtgcccggggccaacgtggccgggttagtccaggtc
aaaagcggtaggctaaaaccagccttcattattcagccgatttga
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