Scrofimicrobium appendicitidis: SAC06_08265
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Entry
SAC06_08265 CDS
T10714
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sapp Scrofimicrobium appendicitidis
Pathway
sapp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sapp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAC06_08265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sapp03021
]
SAC06_08265
03400 DNA repair and recombination proteins [BR:
sapp03400
]
SAC06_08265
Enzymes [BR:
sapp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAC06_08265
Transcription machinery [BR:
sapp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAC06_08265
DNA repair and recombination proteins [BR:
sapp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAC06_08265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XBW07627
UniProt:
A0AAU7V6F9
LinkDB
All DBs
Position
complement(1801799..1802794)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPVLTEEVVNENRSRFTLEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIYIEGVE
HEFRTIEGVKEDVSEIILNVKQLVLSSENDEPVLMYLRKQGPGEVTAADIVPPAGVEVHN
PDLHIATLNEHGKLEIELTVERGRGYVTAAQNKDLDGKKSLIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIIDVETKPAIAPRDAIASAGKTLVELFGLARDLNIEAEGIEIGPTVTD
ETLAADLALPIESLNLQSRSYNALRRRGILTVGELVAHSEADLLDIRNFGTKSIEEIKES
LASLGMVLKDSQMPGGADADGGSIFSDTPAI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgacccgttttgaccgaagaggttgtgaacgagaaccggtcccgg
ttcaccctggagcccctggagcctggcttcggctacaccctgggcaactcattgcgccgc
acgctgctgtcctccattccgggggccgcagtgacctcgatctacatcgaaggggtggag
cacgagttccgcaccatcgagggggtcaaggaagatgtttcggagatcatcctgaacgtc
aagcagctggtactgtcctcggaaaatgatgagccggtcctgatgtacctgcgcaagcag
gggcccggcgaagtgaccgcggcggacattgtcccgcccgcgggcgtggaagtgcataac
cccgacctgcacattgcgactctgaacgagcacggaaagctcgaaattgagttgacggtg
gagcggggccgcggttacgttaccgccgctcagaacaaggatctggacgggaagaagtcc
ctcattccggtggactccatctactcgccagttctgaaggtcacctacaaggtggaggcg
acccgtgttgagcagcggaccgacttcgataagctgatcatcgacgtggagaccaagccg
gcaattgcgccgcgcgacgcgattgcttccgcgggcaagaccctggtcgagctgttcggc
ctggcacgggatctgaacatcgaggcggagggcattgaaattggccccaccgttaccgac
gaaacgctggccgctgacctggccctgccgatcgagagcctgaacctgcagtcccggtcc
tacaacgctctgcgtcggcgcggtatcctcacggtcggtgagctggtggcgcactccgaa
gcggacctgttggacattcggaacttcgggaccaagtccatcgaagagatcaaagagtcc
ctggcctccctgggcatggtgctcaaagactcgcagatgcccggcggggcggatgccgat
ggcggctcgatcttcagtgacacgccggccatctaa
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