Scrofimicrobium appendicitidis: SAC06_08525
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Entry
SAC06_08525 CDS
T10714
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sapp Scrofimicrobium appendicitidis
Pathway
sapp03020
RNA polymerase
Brite
Enzymes [BR:
sapp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAC06_08525
Transcription machinery [BR:
sapp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAC06_08525
DNA repair and recombination proteins [BR:
sapp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAC06_08525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XBW07679
UniProt:
A0AAU7V5W1
LinkDB
All DBs
Position
complement(1862429..1866343)
Genome browser
AA seq
1304 aa
AA seq
DB search
MLDAKTFDGLKISLATAEDISEWSFGEVKKPETINYRTLKPERDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRSKVRRERMGHIDLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMITEVDEAGRREDENMLRDELEVEKKRMETGRDAAINRRYEELESR
LAELEADGAKPEALELERKTTDREVGKLRKKWDNEIENLDRVWERFRDLKVGDLEGDEGL
YRAMKTRYGTYFEGSMGAQAIQKRLRDFDLAAEVEILRDIIANGTGQRRTRALKRLKVVN
AFLATGNKPESMVLTKIPVIPPDIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIINNEKRMLQESVDALFDNGRRGRPVSGAGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDKNYAQNVKAAKRKVERQH
SEVWDVLDEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLACGAFNADFDGDQ
MAVHLPLGAEAQAEARILMLSTNNILKPSDGRPVAMPSQDMIYGLFYLTQDPDDQFADDL
DEDGNVRVPEYTSVAEATMAFDAGRITLNRQIKLRFTDLVPPSDWEAPEGWSEGEPIELV
TTLGRALFNEALPVDYPYVNRAVKKGLLSQIVNELATRYPNVLVAESLDALKSSGFYWAT
WSGGTISFADIQQAPHKEAILAEYEEKAAEIQRQFDMGLIGDDDRYRELVDIWTECTAKV
AEDMRDNFSAQNPVYRMVDSGARGNWSQIQQLAGMRGLVSDPKQKLIERPIKANYREGLT
VAEYFIATHGARKGTADTALRTAESGYLTRRLVDVSQDVIVREENCGTRRGVEIVIGYPT
SDGALAPSEILETTAYARVLARDAVAPDGTVVAEAGSEVDAAVLDEMLAAGIEKIRVRSV
LTCDSLVGTCAACYGRSLASGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAASGGS
DITQGLPRVQELFEARTPKGEAKMNEAAGVVKIDDDDPSIRKIIIKRDDDKEDLVIEVSR
RQDLLVRDGQHIETGTQLTEGRLDPKEVLRLRGGSAAQTQLVSEVQEIYRSQGVDIHAKH
IEVIVRQMMRRVTVLEPGDTNFMPGELVDSVAFREENRRIAAEGGTSAKGRQMLMGITKA
SLATDSWLSAASFQETTKVLTEAAMNSKIDPLVGLKENVILGKLIPAGTGLARYNNVTVE
PTAEAMAASNYNPIDFPAPDDTEGLEDFEQFLANMDLGPGFLSN
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgcaaagactttcgatggtttgaagatttctctggcgaccgcagaggacatt
tccgagtggtccttcggcgaagtgaagaagccggagaccattaactaccgcacgctcaag
cccgagcgggacggcctgttctgcgagcgcatctttggcccgacccgggactgggaatgc
gcctgcggcaaatacaagcgggtccgctacaagggcatcgtttgtgaacggtgtggggtg
gaggtgacccggtccaaggttcgccgtgaacggatgggtcacatcgacctggccgcgccg
gtcacccacatctggtacttcaagggagttccctcccgcctgggctacctgctgaacctg
gctcccaaggacctggaaaaggtcatctacttcgccgcctacatgatcaccgaggtggac
gaggcgggccgccgtgaagatgagaacatgcttcgcgacgagctggaagttgaaaagaag
cggatggagaccggccgcgatgccgccatcaaccgccgctacgaggagctggagtcccgc
ctcgccgaactggaggccgacggcgccaagcccgaagctctggagctggagcgcaagacc
accgaccgtgaggtcggcaagctgcgcaagaagtgggacaacgagatcgagaacctggat
cgggtgtgggaacgtttccgcgacctgaaggttggggatctggaaggtgacgagggcctg
taccgggccatgaagacccgctacggcacctacttcgagggctcgatgggagctcaggcc
attcagaagcgcctgcgcgacttcgatctggcggccgaggtggagatccttcgcgacatc
atcgccaacgggaccggccagcgtcggacccgggcgctgaagcgcctgaaggtggtcaac
gctttcctggcgaccggcaacaagcccgagtccatggtgctgaccaagattccggtcatt
ccgccggacattcggcccatggtccagctggacggtggacgctttgccacctcggacctc
aacgacctgtaccgtcgcgtgatcaaccggaacaaccggctcaagcgactgctggatctg
ggtgcgcccgagatcatcatcaacaacgagaagcggatgctgcaggagtcggttgacgcc
ctgttcgacaacggccgccgtggccgcccggtttccggcgcgggcaaccgtcccctgaag
tcgatctccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtggactactcgggccgttccgtcatcgtcgttggtccccagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagcccttcgtcatgaagcggctg
gtggacaagaactatgcccagaacgtgaaggcagccaagcgcaaggttgagcgccagcac
tccgaggtgtgggatgtcctggacgaggtcattcgcgagcacccggtgctgctgaaccgc
gcgccgaccctgcaccgcctcggaatccaggccttcgagccgcagctgattgagggtaaa
gccatccagctgcacccgctggcttgcggtgcgttcaacgcggacttcgacggcgaccag
atggccgtgcacctgcccctgggggcggaagcgcaggccgaggcgcggatcctgatgctg
tcgaccaacaacatcttgaagccctctgacggtcgcccggtggccatgccttcgcaggac
atgatctacggcctgttctacctgacccaggacccggacgatcagttcgccgacgacctg
gatgaggacggcaacgttcgcgtccccgagtacacctcggtggccgaagccaccatggcg
ttcgacgcgggccggatcaccctgaaccgtcagatcaagctgcgtttcaccgacctggtt
ccccccagcgactgggaggctccggaaggttggtcggaaggcgagccgatcgaactggtg
accacgctcggtcgcgccctgttcaacgaggcgctgccggtcgactacccgtacgtgaac
cgcgctgtgaagaaggggctgctgtcccagatcgtcaacgagctggccacccggtacccg
aacgtgctggtggccgagtcgctcgacgcgctcaagtcctccggtttctactgggcgacc
tggtcgggcggcaccatctccttcgccgacatccagcaggctccccacaaggaagccatc
ctggctgagtacgaggagaaggcggctgagattcagcgtcagttcgacatgggtctgatc
ggcgacgacgaccgctaccgcgaactggtcgacatttggaccgagtgcaccgccaaggtg
gccgaggacatgcgcgacaacttctcggcgcagaacccggtctaccggatggttgactcc
ggtgctcgtggtaactggtcgcagattcagcagctggccgggatgcgcggactggtgtcc
gacccgaagcagaagctgatcgagcgtccgatcaaggcgaactaccgcgaaggcctgacc
gtcgccgagtacttcatcgccacccacggcgcccggaagggaaccgccgacacggcgctt
cgtaccgccgagtccggctacctgacccgtcgtctggtcgacgtctcccaggacgtgatt
gtccgcgaggagaactgtggcacccgacgcggcgtcgaaatcgtcatcggctaccccacc
tcggacggggcgttggctccttccgagatcctcgaaaccacggcctacgcccgggtgctg
gctcgcgatgcggtcgctcccgacggcaccgtcgtggccgaggccggctccgaggtcgac
gcggctgtgctcgacgagatgctggccgcggggatcgagaagatccgggtccgctcggtt
ctgacctgtgactcactggtgggcacctgcgccgcctgctacggccggtcgctggcttcg
ggcaagcgggtcgacatcggcgaagcggtgggcatcatcgccgcccagtcgattggcgag
cccggcacccagctgacgatgcgtaccttccacaccggtggcgctgcctccggtgggtcc
gacatcacccagggtctgccgcgcgtgcaggaactcttcgaggctcgtacccccaagggt
gaagccaagatgaatgaggccgccggcgtcgtcaagatcgacgacgacgacccgtcgatc
cgcaagatcatcatcaagcgggacgacgacaaggaagacctggtcatcgaggtctcccgg
cgtcaggacctgctggtccgcgacgggcagcacattgagaccggcacccagctgaccgaa
ggtcgactggacccgaaggaagtcctgcggctgcgcggcggctctgctgcacagacccag
ctggtttccgaagttcaggagatctaccggtcccagggtgtggatatccacgccaagcac
atcgaggtcatcgtccgtcagatgatgcgccgcgtgaccgtgctggaaccgggtgacacc
aacttcatgccgggcgaactggttgactccgttgccttccgcgaggagaaccgccggatt
gctgctgaaggtggcacctcggccaagggccgccagatgctgatggggatcaccaaggcg
tcgctggccaccgactcgtggctgtcggccgcctccttccaggagacgaccaaggtgctg
accgaggccgcgatgaactccaagatcgacccgctggtcggcctgaaggagaacgtcatc
ctcggtaagctgattccggctggcaccggcttggctcggtacaacaacgtcaccgtggag
ccgaccgcggaagcgatggccgcctcgaactacaacccgattgacttccccgctcccgat
gacacggagggcctggaagacttcgagcagttcctggcgaacatggacctgggtccgggc
ttcctcagcaactag
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