Entry |
|
Symbol |
pcrA
|
Name |
(GenBank) DNA helicase PcrA
|
KO |
|
Organism |
sapp Scrofimicrobium appendicitidis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:sapp00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAC06_08835 (pcrA)
03430 Mismatch repair
SAC06_08835 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:sapp03400]
SAC06_08835 (pcrA)
Enzymes [BR:sapp01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAC06_08835 (pcrA)
DNA repair and recombination proteins [BR:sapp03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAC06_08835 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SAC06_08835 (pcrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1929898..1932366)
|
AA seq |
822 aa
MDLFDAFANSHSAAPSGPRSRAAQQAASALTVSWEGTDAFSDREQNPETLLEGLNQQQAE
AVAYQGGPLLIMAGAGSGKTRVLTHRIAYLLATGRATAGQILAITFTNKAAAEMRERVGA
LVGPQARRMWVSTFHSACVRILREQYRAAGLKSTFSIYDQQDSQRLLGMILRAHDVDTKR
FTPRLISARISDLKNELITPSQYFEQVPSDPVSEVVADAYAEYQKRLTQANAVDFDDIIM
RTVQTLQAHPDVTEYYQRRFRHILVDEYQDTNHAQYVLVRTLVGVDRSALPPAELTVVGD
SDQSIYAFRGASIRNIEEFELDFPNAHTILLEQNYRSTQNILSAANAVIKHNGGRRPKNL
WTAQGAGDPIVVDAADSEHDEARLVVREIDDLGAKGVDMGDIAVFYRTNSQSRALEELLL
RMGIPYRIVGGTRFYERQEIKDALAYLQAITNPDDTVALRRIINTPRRGVGARAEAALMA
HADRYGISLGEALADAREGADRPIEGLAPRAAKSVAEFWAMMQDLRALARADEPAAHILD
EVLTRSGYLESLRASEDPQDASRVDNLAELLSVAEDFDTTRREAPPEEGEQLGSLDAFLE
RVALVADADQVPSEGKRGGEVTLMTVHTAKGLEFPYVFVTGMEDGTFPHRRSLEDPAELA
EERRLAYVAITRARQRLYLTRAATRSAWGLPEEMPPSRFLDNLPEENIERRHQTTRERLA
SRPGGSDGGRVFGAGAPGSLKRTFVRQTAPSSAPTRRLGGRLGESEDKPVLQLKVGDRVQ
HGTLGEGVVIGMEGSGKTSVARIDFGSTTKRLLLRMAPLKKL |
NT seq |
2469 nt +upstreamnt +downstreamnt
atggatctctttgacgctttcgccaactcgcattctgccgctcccagtgggccccggtcg
cgcgctgcgcagcaggcggcttccgccctgaccgtcagctgggaggggaccgacgccttc
tctgatcgggagcaaaacccagaaacactgctcgagggactgaaccagcagcaggcggag
gcggtggcctatcaggggggtccgctgctgatcatggcgggggccggctcgggcaaaacc
cgggtgctgacccatcgaatcgcctatctgctggccaccgggcgggccactgccggtcag
atcctggcgatcaccttcaccaacaaggcggccgctgaaatgcgtgagcgggttggggcc
ctggttggcccccaggcgcggcggatgtgggtgtcaactttccactcggcctgcgttcga
atcctgcgtgaacagtaccgggccgccggcctcaaaagcaccttcagtatctacgatcag
caggactcccagcgcctgctgggaatgatcctgcgcgcccacgacgtcgacacgaagcgg
ttcaccccccgcctgatttcagcccgcatttccgacctgaaaaatgagctgatcaccccg
tcccaatactttgagcaggttccttcggatccggtgtcagaggtggtggccgacgcctac
gccgagtatcaaaagcgcctcacccaggccaacgccgtcgatttcgacgacatcatcatg
cgaaccgtgcagaccctgcaggcccacccggacgtaaccgagtattaccagcgccgattc
cggcacatcctggtggatgagtaccaggacaccaaccacgcgcagtacgtgttggtgcga
acgctggtcggggtggatcggtcggctttgcctccggccgaactgaccgtggtcggcgat
tcggaccagtcgatctacgccttccgcggggcctcgatccgcaatattgaagagtttgaa
ctggacttcccgaacgctcacacgattttgctggagcaaaactaccgctccacccagaac
attctcagcgctgccaacgcggtgatcaaacataacgggggccggaggcccaagaacctg
tggaccgcccagggggccggggacccgattgtggtggatgccgccgacagtgagcatgac
gaggcgcgcctggtggtgcgagagatcgacgacctgggggccaaaggggtagacatgggt
gacatcgccgtgttctaccggaccaactcccagtcgcgggccctggaggaactgctgctg
cgaatggggatcccgtaccggatcgtgggtgggaccaggttctatgagcgccaggaaatc
aaggatgctctggcctacctgcaggccatcaccaaccccgacgacacggtggctttgcgc
cgcatcatcaacaccccccggcgaggggtgggtgcccgggccgaggccgccctgatggcg
catgccgaccgatacggaatctcgctcggggaggcgctggcggatgcgcgggaaggggcg
gaccgaccgattgagggactggccccgcgggccgcgaagtcagtggccgagttctgggcc
atgatgcaggacctgcgggcgttggctcgggcggacgaaccagcggctcacattcttgac
gaagtcctgacccgcagcggttacctggagtccctgcgtgcctccgaggaccctcaggat
gcttcccgggtcgacaacctggccgaactgctctcggtggcggaggacttcgacaccacc
cggcgggaggcacccccggaagagggggaacagctgggcagcttggacgcatttttggag
cgggtggcgctggtggccgacgcggatcaggttccctccgaaggaaaacgtgggggagag
gtcacgctgatgaccgtccacacggccaaggggcttgagtttccctacgtgttcgtcacc
gggatggaagacggcaccttcccgcaccggcgctcgctggaggacccggccgagttggca
gaggaacggcgcctggcctacgtggcgatcacgcgtgctcggcagcgtctctacctgacc
cgggcggccacccgctcggcctggggactgcccgaggaaatgccgccctcgcgattcctg
gacaacctgcccgaagagaacattgagcgccggcaccaaaccacgcgggaacgactggcg
tccaggcccggtggctccgatggcggtcgggtgtttggcgctggtgcgcccgggtcgctg
aaacggacttttgtccgccaaactgccccgtcgtcggctcccaccaggaggctgggtggg
cgcctaggtgagagtgaagacaagcccgtcttgcagctgaaggtcggggatcgcgtccaa
cacggcaccctgggcgaaggggtggtgatcggaatggaaggaagcgggaaaacctccgtg
gctcgaatcgatttcggcagcaccaccaagcggctgctgctccggatggcaccgttgaag
aaactgtag |