Salinispora arenicola: Sare_0486
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Entry
Sare_0486 CDS
T00613
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
saq
Salinispora arenicola
Pathway
saq00300
Lysine biosynthesis
saq00470
D-Amino acid metabolism
saq01100
Metabolic pathways
saq01110
Biosynthesis of secondary metabolites
saq01120
Microbial metabolism in diverse environments
saq01230
Biosynthesis of amino acids
Module
saq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sare_0486
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sare_0486
Enzymes [BR:
saq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sare_0486
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF2630
Motif
Other DBs
NCBI-ProteinID:
ABV96415
UniProt:
A8M094
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All DBs
Position
555708..556961
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AA seq
417 aa
AA seq
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MTDHAALAEEYGTPLFVYEADTVAAQYTGLRQRLHPAMDIFYSLKANPNLALCGHLRSLG
AGAEVSSLLELTTAREAGVPPGDIVFPGPGKSREEITACLDAQIYAIICESFEELELVND
LARERGVRARVALRVNPAFAVKGSGLTMGGKPRQFGIDEAHLFALPGLRLAHLRVVGVHV
YLGTRILDETVIAENTRRILELAERLAAHLDFPLEFVDVGGGLGVAYFDGERDLAVERLT
DLVNPVVADFHDRHRDTRLIMELGRYLVAPAGTYLIRVRYVKSSMGERFAVTDGGTHQHM
AAVGIGSFVKRDFPLRLLGRPTDGPLVRWTVTGPLCTPNDTLVRAAELPDLRRGDLLGVL
RSGAYGPSASPTLFLGHGHPAEVLVRNGVGCLVRHRDQVADLLRQQRSLVTTGGDPR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccacgccgcgctggccgaggagtacggcaccccgctgttcgtctacgaggcc
gacaccgtcgccgcgcagtacaccggcctgcggcagcggctgcacccggcgatggacatc
ttctactcgctcaaggcgaacccgaacctggcgctctgcggccacctgcgctcgctcggt
gccggcgccgaggtgtcgtcgctgctcgaactgaccaccgcccgcgaggccggcgtgccg
ccgggtgacatcgtcttccccggtcccggcaagagccgggaggagattaccgcctgcctg
gacgcgcagatctacgcgatcatctgcgagtcgttcgaggagctggagctggtcaatgat
ctggcccgggaacgcggcgtccgggcccgggtcgcgctccgagtcaacccggccttcgcc
gtcaagggctccggcctgaccatgggcggcaagccccggcagttcggcatcgacgaggcg
cacctgttcgccctgcccggtctgcgcctcgcccacctgagagtggtcggtgtgcacgtc
tacctgggcacccggatcctcgacgagacggtgatcgccgagaacacccgacgcatcctg
gagctcgccgagcgcctcgcggcgcacctggacttcccgctggagttcgtcgacgtcggc
ggtgggctcggcgtggcctacttcgacggcgagcgcgacctggccgtggagcgcctcacc
gacctggtcaacccggtggtcgccgacttccacgaccggcaccgcgacacccggctgatc
atggagttgggccggtacctcgtcgctccggccggcacctatctgatccgggtgcggtac
gtgaagagctcgatgggtgagcgcttcgcggtcaccgacggcggtacccaccagcacatg
gcggcggtcggcatcggctccttcgtcaagcgtgacttcccgctgcgcctgctcggccgg
cccaccgatggaccgctcgtccggtggacggtcaccgggccgctgtgcaccccgaacgac
accctggtccgggccgccgagctacccgacctgcgccggggcgacctgctcggcgtgctc
cgctccggcgcgtacggcccgagcgcctcgccgacgctgttcctcggacacggccacccc
gccgaggtcctggtgcgcaacggcgtcgggtgcctggtccggcaccgcgaccaggtggcg
gacctgctccgccagcagagaagcctcgtcaccacgggaggagacccacgatga
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