KEGG   Salinispora arenicola: Sare_1190
Entry
Sare_1190         CDS       T00613                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
saq  Salinispora arenicola
Pathway
saq02024  Quorum sensing
saq03060  Protein export
saq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:saq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Sare_1190
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Sare_1190
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Sare_1190
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:saq02044]
    Sare_1190
Enzymes [BR:saq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Sare_1190
Secretion system [BR:saq02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Sare_1190
  Eukaryotic Sec-SRP protein
   Sare_1190
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 nSTAND3 cobW Zeta_toxin APS_kinase ArsA_ATPase AAA_31 MobB AAA_18 AAA_33 NACHT MMR_HSR1 AAA_30 AAA_16 AAA_5 Thymidylate_kin NPHP3_N TsaE ATP_bind_1 AAA AAA_25
Other DBs
NCBI-ProteinID: ABV97098
UniProt: A8M673
LinkDB
Position
1342329..1343873
AA seq 514 aa
MFDTLSDRLSGIFTKLRGKGRLTDADIDATAREIRLALLEADVALPVVKGFIARVKERAR
GAEVSQALNPAQQIIKIVNEELINVLGGEGRRLQFAKQPPTVIMLAGLQGSGKTTLAGKL
ASWLRGQGHQPLLVAADLQRPNAVGQLQVLGGRAGVEVYAPEPGNGVGDPVQVAQASIEH
ARRAARDIVIVDTAGRLGIDAEMMRQAADIRDAVDPDEVIFVIDAMVGQDAVRTAEAFRD
GVGITGVVLSKLDGDARGGAALSVREVTGQPILFASTGEKLEDFDVFHPDRMASRILGMG
DVLTLIEQAEQAFDVDQKEKMTAKLMGGEQFTLEDFLDQLIAVRRMGPIANVLSMMPGMG
QMKDQLAELDDKHFDRVTAIIRSMTPAERTNPKIINGSRRARIANGSGVTVMDVNQLLNR
FTDAQKMMKQMGGMMGLPGGRRKATKSPKNKRKGAKGGGRSRAGAGTRGGLPGGMPQLPP
GLGPDDLAGQGLPPGFKLPKIDFNKLGKGDQRPR
NT seq 1545 nt   +upstreamnt  +downstreamnt
gtgtttgacaccttgagtgaccgcctgtccgggatcttcaccaagcttcgcggtaagggg
cggctcaccgacgctgacatcgacgccacggcccgcgagatccggctcgcgttgttggag
gcggacgtcgcgctaccggtggtcaagggcttcatcgcgagggtcaaggagcgggcgcgg
ggcgccgaggtctcccaggcgttgaacccggcccagcagatcatcaagatcgtcaacgag
gagctgatcaatgtcctcggtggtgaggggcggcggctccagttcgccaagcagccgccg
accgtgatcatgctggccgggctccagggctccggcaagaccaccctcgccggcaagctg
gccagctggctgcggggccagggccaccagccgttgctggtggccgccgacctccaacgt
cccaacgccgtcgggcagctgcaggtgctcggtggccgcgctggcgtcgaggtgtacgcc
ccggagccgggcaacggcgtcggcgacccggtgcaggtggcccaggcctcgatcgagcac
gcgcgccgggccgcccgggacatcgtcattgtggacacggccggccgcctcggtatcgac
gccgagatgatgcggcaggccgccgacatccgcgacgcggtcgacccggacgaggtcatc
ttcgtcatcgacgccatggtcggccaggacgcggtccgtaccgcggaggcgttccgtgac
ggcgtgggtatcaccggcgtggtcctctccaagctcgacggtgacgcccgcggtggcgcc
gcgctgtcggtgcgggaggtcaccggccagccgatcctgttcgcctcgaccggcgagaaa
ctggaggacttcgacgtcttccaccccgaccggatggccagccggattctcggcatgggc
gacgtcctcaccctgatcgagcaggccgaacaggccttcgacgtcgatcagaaggaaaag
atgaccgccaagctgatgggcggcgagcagttcaccctggaggacttcctcgaccagctc
atcgcggttcggcggatgggtccgatcgccaacgtgctgtccatgatgcccggcatgggg
cagatgaaggaccagctcgccgagctggacgacaagcacttcgaccgggtgaccgcgatc
atccggtcgatgaccccggccgagcgcaccaaccctaagatcatcaacggctcgcgccgg
gcccgcatcgcgaacggctccggcgtcaccgtgatggacgtcaaccagctactcaaccga
ttcaccgacgcgcagaagatgatgaagcagatgggcggcatgatgggcctgcccgggggg
cgccgcaaggcgaccaagtcgccaaagaacaagcgcaagggcgcgaagggcggcggtcgg
tcgcgggccggtgcgggaacgcgcggtggtcttcccggtggcatgccgcaactgcccccc
ggcctgggccccgacgacctggccggccagggcctgccgccgggcttcaagcttccgaag
atcgacttcaacaagctcggcaagggagaccagcgcccccgttga

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