Salinispora arenicola: Sare_1336
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Entry
Sare_1336 CDS
T00613
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
saq
Salinispora arenicola
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saq03016
]
Sare_1336
Enzymes [BR:
saq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sare_1336
Transfer RNA biogenesis [BR:
saq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sare_1336
Prokaryotic type
Sare_1336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ABV97237
UniProt:
A8M755
LinkDB
All DBs
Position
1542196..1543113
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AA seq
305 aa
AA seq
DB search
MRPARLAGLAVVSTDGLIVVDKPGGMTSHDVVARVRRLARTRRVGHGGTLDPMATGVLVV
GVGRATRLLTYVIGAGKSYTATIRLGQATVTDDAEGDVIASTPAGRVTEDAVRAALAAQT
GDVDQVPSAVSAIKIDGQRAYRRVREGKDVDLPARRVTISRLEVRALRRDEPDVVDVDVD
VTCSSGTYVRAVARDAGLALGVGGHLTALRRTAVGGFTLAEAATLDDLERRAPEVVTLSL
PAAADRSFPRREATAEEERVLSHGGPLDPVGIDGPYAVFGPAGGLVAIVSERAGRARAEI
VLAPA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgagaccagcccgtctggcaggcttggcggtcgtgagcacagacggactgatcgtggtc
gacaagcccggcggcatgacgtcgcacgacgtggtggcacgggtgcggcgcctggcccgt
acccgacgggtcgggcacggcggcacgctcgacccgatggccaccggcgtcctggtcgtc
ggcgtcggccgggccacccggctgctgacctacgtgatcggggccggcaagagttacacc
gccacgatccgcctggggcaggcgacggtcaccgacgacgccgagggcgacgtgatcgcc
agcaccccggccggtcgggtgaccgaggacgcggtccgggccgcgctggccgcgcagacc
ggtgacgtcgaccaggtgcccagcgcggtcagtgccatcaagatcgatggtcagcgggcg
tatcgtcgggtgcgggaggggaaggacgtcgacctgccggcccggcgggtcaccatctcc
cggctcgaggtacgggcgctgcggcgggacgaaccggacgtggtggacgtggacgtggac
gtcacctgctcgtccggtacgtacgtgcgggcggtcgcccgtgacgcgggcctggcgctc
ggcgtcgggggccacctcaccgcgctccggcgtaccgctgtgggcggttttaccctcgct
gaggccgccaccctcgatgacctggagcgccgtgcccccgaggtggtcacgctgtcactg
ccggcggcggccgaccggtccttcccgcgtcgggaggcgaccgccgaggaggagcgggtg
ctctcccacgggggtccgctggatccggtggggatcgacggcccctacgccgtcttcggc
ccggcgggtgggttggtcgctatcgtcagcgagcgggccggtcgggcccgcgcggagatc
gtgctggccccggcctga
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